Gene Fnod_0291 details

Gene Information

• Locus tag: Fnod_0291
• ID: 5453145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 311101
• End bp: 313110
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640874037
• Product: NHL repeat-containing protein
• Protein accession: YP_001409814
• Protein GI: 154248989

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCGTA TCAAAAATTC ATTAATTGTG TTTTTTCTAT TACTAAATAT TCTCTTGTTT 
TCTGTCGACA GTACTTTCTT AACATACACG GTCGCTGGAA ACAATATTTG GAAGGTAACA 
CAGGATGCTT ACATAGTAAG CGAGGTACTT TTTAGAGATT ACAATTTGTA CTATCCAGAA 
GATTTATTTA TCAAAGGTTC TAAGATGTAC ATAGCCGATT CTGGGAATGC TAGAATTGTT 
GTTTACGATA TGGAAACTGG AGAAGCAACT AGTATTGGTG ATTTTAAACT TTGGCAACCA 
ACTGGTGTTT TTGTAACAGA TGAATACATT TATGTAGCCG ATCCTGGAAG TTCTGAAGTT 
GTTATTTTCA ATTTAAGAGG TGAAGAGGTA AAACGCATTG GCAGACCAAC AAACCCTATT 
TTTGGAGAAA CTGCAAATTA CAAACCAAAA AAACTTGTCG TAAATAAAAG AGGAAATTTG 
TACATAGTTA GTGAAGGAAC ATTTGAGGGT ATCATACAAC TTGATAAAGA TGGAGAGTTC 
CTTGGATACT TCGGAAGCAA TTTAGTTGGT GTAACGCTTC TTGATAAATT TATAGATTTG 
TTTTACACAA GAGAACAGAA AGAAAAATTT CTTCATAGGA TTCCTAAACC TTACACAAAT 
ATAACTATTG ACGATAAGGG ATTAATATAC ACGGTAACTC AAAAGGAGTA TGGAAACGCT 
ATTAAAAAGC ATAATACTAT AGGATTGAAC ATATTATCCG CATCAAAAGA AAGAAGAATG 
GTTGACGAAG ATAATTTTGT AGATATAGCT GTTGACAAAG ATGGAAGAAT TTACGCGCTT 
ACCGAAACGG GTCTAATATA CGAATATGAT TCTGAAGGAA ATTTGATTTT TTCATTTGGT 
GGTCGAGCAA TATCAACGGA GAGGTCTGGA TTATTTTCCG TTGCCTCTGC TATTGAAATC 
GACGAAATGG GCAAGTTGTA CGTTTTAGAT AAAGAGAGAG GTTTAGTACA TGTTATTGTC 
CCTACGGAAT ACGCCAACAT ACTCCATCAA GCATTAAATC TTTACGAACA GGGAAAATAC 
ATAGAGAGTA AGAGATTGTG GGAAAAAGTG ATGACTTACG ACGGTTATTC CAAAATAGCA 
CACTATGGAC TTGGCAAAGC ATATTTCCAA TCAGCTCGGT ACGATAAAGC TGCACTGCAT 
TTCAAGGAAG CTTTCGCGAG AAGAGATTAC TCAGATGCTT TTTGGGAAAT GAGAAATAAT 
TTTTTGCAGA AGAATATGGG AATTATTTTG TCTTTACTTG TAATCATCAT ATTAATTTTT 
ACAATTATTG ATTTATTATC AAGGTATGGG AAGATTAAAA TAAAGTTCCA TGTAAAAAAT 
AAGTTGCTAT CGGACGTACT TTATATAAAA AATATTCTTA GGCATCCTTT GGATACTTTC 
TATTATTTGC AAAAGAAAAA GCATGGCTCT GTTCTTTCCG CTTCAATTAT TTACTTAATG 
TTCCTCTTAG TTATCTTAGT AGATTATTTT GGCCGAAGTT TTATATTTAA TCTCAATACA 
AGCGATAGAA ACGTTGGATT TGTTTTACTA ACATCATCGT CTATTTTATT TTTGTGGATT 
ATATCCAACT GGCTTGTCAG CTCTATAAAC GACGGCAAAG GAACGTTGAG AGATATATAC 
GTTTTTACTG CATATTCTTT TGCACCGTAT ATATTATTCC AACCATTAGT AATATTGAGT 
ACATATGTGC TTACATATAA CGAAAAGTTT TTAATCGATT TTGCATCGAT GTTTTTAATC 
TCATGGAGTG CTGTGATGTT ATTTACCGGA GTAAAAGAAA CACACGACTA TGATATTAAG 
AACACGGTGA AAAGTATTTT ATTTACATTA GGTTGGGTTT TCGTGATAAT ACTCGTTTAT 
TCTATCGTTT ACATGCTTTG GGATCAACTA GTAGAAACCG CATTTAGCAT TGTCCAGGAG 
GTGTTGTACC GTGTTAGGAA TATCCGATAA 

 

Protein sequence

MKRIKNSLIV FFLLLNILLF SVDSTFLTYT VAGNNIWKVT QDAYIVSEVL FRDYNLYYPE 
DLFIKGSKMY IADSGNARIV VYDMETGEAT SIGDFKLWQP TGVFVTDEYI YVADPGSSEV 
VIFNLRGEEV KRIGRPTNPI FGETANYKPK KLVVNKRGNL YIVSEGTFEG IIQLDKDGEF 
LGYFGSNLVG VTLLDKFIDL FYTREQKEKF LHRIPKPYTN ITIDDKGLIY TVTQKEYGNA 
IKKHNTIGLN ILSASKERRM VDEDNFVDIA VDKDGRIYAL TETGLIYEYD SEGNLIFSFG 
GRAISTERSG LFSVASAIEI DEMGKLYVLD KERGLVHVIV PTEYANILHQ ALNLYEQGKY 
IESKRLWEKV MTYDGYSKIA HYGLGKAYFQ SARYDKAALH FKEAFARRDY SDAFWEMRNN 
FLQKNMGIIL SLLVIIILIF TIIDLLSRYG KIKIKFHVKN KLLSDVLYIK NILRHPLDTF 
YYLQKKKHGS VLSASIIYLM FLLVILVDYF GRSFIFNLNT SDRNVGFVLL TSSSILFLWI 
ISNWLVSSIN DGKGTLRDIY VFTAYSFAPY ILFQPLVILS TYVLTYNEKF LIDFASMFLI 
SWSAVMLFTG VKETHDYDIK NTVKSILFTL GWVFVIILVY SIVYMLWDQL VETAFSIVQE 
VLYRVRNIR