Gene Fnod_0280 details

Gene Information

• Locus tag: Fnod_0280
• Symbol: upp
• ID: 5451636
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 298346
• End bp: 298969
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640874026
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001409803
• Protein GI: 154248978
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.706129
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTATATG TAGTTGATCA CCCATTGATA AAGCATAAAC TCACGATTAT GAGAAAGAAA 
GAGACGGGTC CAAAAGAATT TAGGGAACTA TTAAGAGAAA TTACCCTTTT GATAACATAC 
GAAGCTACAC GTCACATACC AGTTTATGAA TTGGAAGTTG AAACCCCGTT AGAAAAAACC 
AAGGGTTATT ACATAAATGA TAAAGATATT GTTGTTATAC CCATATTACG TGCTGGACTT 
GGTATGGTTG ATGGAATACT TGAATTGCTA CCTAATGCGT CAGTTGGACA TATAGGCATC 
TACCGCGATC CAGAAACGTT GAAAGCTGTT GATTATTATT TCAAAACTCC AAAGCTCCAC 
GATAAAAGTG AAATCTTTAT TCTTGATCCA ATGTTGGCAA CTGGAGTGTC TGCAATAGAC 
GCAATAACAA AGGTTAAAGA ACTCGGTGGA AAGCAAATCA CATTCATATC TTTGATTTCC 
TCACCAGAAG GTGTAAAGGC TATCGAGAAG GCTCATCCGG ATGTGAATAT ATATACCGCA 
TCACTTGACA GAGAACTTAA CGACCATGGT TACATATTAC CTGGCCTTGG AGATGCCGGA 
GATAGATTAT TCCGAACAAA GTAA 

 

Protein sequence

MLYVVDHPLI KHKLTIMRKK ETGPKEFREL LREITLLITY EATRHIPVYE LEVETPLEKT 
KGYYINDKDI VVIPILRAGL GMVDGILELL PNASVGHIGI YRDPETLKAV DYYFKTPKLH 
DKSEIFILDP MLATGVSAID AITKVKELGG KQITFISLIS SPEGVKAIEK AHPDVNIYTA 
SLDRELNDHG YILPGLGDAG DRLFRTK