Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0276 |
Symbol | miaA |
ID | 5452074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 293677 |
End bp | 294603 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874022 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_001409799 |
Protein GI | 154248974 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.375428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGA AGAGGATTAT CATTTCTGGT CCCACTGGTG TTGGCAAGAC AGACTTAATT GTTGAAATAT CAAAAAATTT ACCAATAGAA GTCATTTCCA TGGATTCTAG GCAGATTTAT AAGTATATGG ATATAGGAAC AGCTAAGCCT GACCCATATC AGTTGATGTT AGTTAAGCAT CATATGATTG ATATTATAGA ACCTAATGAA TATTTTAATG CCTTTTTGTA CCAAAAAATG GCAAAGGAAA TTGAAAAAGA AATCCTATTA AGAGGAAAAA TCCCTATTTA TGTTGGAGGT ACTGGACTTT ATATAGATGC TCTTGTAAAA GGTTTTTTTG AAGGAGTACC ACGTGATGAA AATATCCGAA AAGAACTTAG TAAATTAAAT GAACAAGAGC CAGGCATATT GAGAAAAATG CTTGAAGAAT TTGATCCAGA AGCCGCAAGC AGAATACATC CACAAGACAT GAAAAGAACC ATCAGGGCAT TGGAAGTTTA TCTAAAAACG GGAAAGAGAA TTTCTGAATT ACAAAAACAA GATAAATCAG ATGATTTTGT TTTAATTGTT TTGAATACAG ACAGGAACAT ACTGTACGAA CGTATCAACA TTAGAGCTGA AAAAATGATC GAACACGGTT TAATAGACGA GGTTAAAGAA CTCATAGAAA AATACGATAA AACACTCGAT ACCTTTAAAA CTATTGGATA CAGAGAGATA ATAGATTATT TAGATGGTAT ATATGGTCTT GAGACTGCTA TTCATCTCAT CAAAAGAAAC ACAAGACATT ACGCAAGAAG GCAGTTAATA TACCTTAGAA GATTTAAAAA CTCATTATGG TTTGATCCAC TTCACTCTGA AACAAAAGAA AAAATCGTAG AGATAATTTC TGGTGTTTAT AACGAATTAT CTCAAAAAAA AGAATGA
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Protein sequence | MNLKRIIISG PTGVGKTDLI VEISKNLPIE VISMDSRQIY KYMDIGTAKP DPYQLMLVKH HMIDIIEPNE YFNAFLYQKM AKEIEKEILL RGKIPIYVGG TGLYIDALVK GFFEGVPRDE NIRKELSKLN EQEPGILRKM LEEFDPEAAS RIHPQDMKRT IRALEVYLKT GKRISELQKQ DKSDDFVLIV LNTDRNILYE RINIRAEKMI EHGLIDEVKE LIEKYDKTLD TFKTIGYREI IDYLDGIYGL ETAIHLIKRN TRHYARRQLI YLRRFKNSLW FDPLHSETKE KIVEIISGVY NELSQKKE
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