Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0259 |
Symbol | |
ID | 5453149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 269285 |
End bp | 271171 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640874005 |
Product | ferrous iron transport protein B |
Protein accession | YP_001409782 |
Protein GI | 154248957 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0370] Fe2+ transport system protein B |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00437] ferrous iron transporter FeoB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00038951 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATAA CAGTCGGTCT TCTTGGAAAT CCAAATGTAG GCAAGACTAG TTTATTCAAC AAACTTGTTG GCGCGCGCCA ATACGTTGCG AATTGGCCGG GTGTTACAGT TACAAGAATT GAAGGCGCAA CAAGCTATAG GGACTATACA TTACACTTCG TTGATTTACC AGGTGTTTAT TCGCTTTCTG CTACTTCTTT AGATGAAAAG GTTACACGAG ACTTTCTTCT TTTTACTCCT CCAAATGTCA CGGTCGTTGT TATAGATAGC ATGACACCTG AACAAGGTAT GTACCTTTTG TTAGAATCTC TTGAACTAGG CTTAAATGTT GTTGCAGTTT TTAACACTAT AGACGAAGCA AAGAAGAATG GCATAAACAT CGATAAAGAA GCGTTACAAA CATTTTTGGG TGTACCAGTA GTTCTAACTT CCGCCCATAC AGGTGAAGGT ATTGACGAAT TGAAGGAAAC GATAATTAAC TCATTTAAAA AGGTAACGCG AACAAAATTA TTTGAATATG GCGAAGAAAT AGAAAATCTA ATAAAGAAAG TAGAAAATTG CGTCTCAAAC GAATACAACA AAAGATTTAT GGCAATAAAA TACCTTGAGA ACGATAAATT CGTTCGTGAA TTAATAAATA ATTGCGACTT TACAACAGAT GAATCAATAG CCACGGAAAT AGCTAAAAAG AGGTATGAAT ACATAACCGC AATAATTTCG AGATGTTTTA CCAAATCGAA CAATTTGTTA TCCACCATGG AAGCTTTAGA CCATGTTTTA ACGCACAAAT ATTTAGGCAT ACCTATATTT ATTTCACTCA TTTATTTAGC ATTTAACTTT ACATTTAAAA CTTCGGAACC TTTAGTTGGA CTTTTGGAAT TCCTATTTGG AAAACTTGTC GAATTTATAG GAAACGACAC TATGTTTAAA TCTTTAATAT CTGATGGAAT TATAAATGGC GTTGGAAGTG TTTTAGCTTT TATACCAAGC ATATTTGCCT TATTCTTTGC ACTTGGGATA ATGGAAGAAA GTGGATATTT ACCAAGAATA GCATTTATTA TGGATAAATT AATGTACTCT CTAAGACTGA CAGGTCGTTC ATTTATGACC TTACTCTTAG GGTTTGGTTG CAACGTCAGT TCAATAATGG CAGCTCGTGG CTTATCTGAC GAGCGAGAAA GAATAACAAC CATTTTGGTG TCTCCATTCA TAAGTTGTAA CGCACGAATA CCTGTTTATC TAATGATAAT AGGCGTGGCT TTTTCGCAAT ACAAAGCTGA AGCTTTCTTT TTAATTTATC TTTTAAGTAT AGTACTTACC GCTATCTCAT CAAGAATTGT CAACAAAGTT ATACTTAAAG GAGAAACTGT ACCTTTTATA ATGGAATTAC CACGGTACAG GCTTCCAAAA TTATCAAATA TAGCAGTGTA TATGTGGAAC AGAGGTAAAC ATTTTATCGA AAAAGCTGGA ACAATAATCT TTGCAGCAAG CATAATTGTA TGGGCACTCT CGTATTTTCC AGATCCAAAC AATATTGAAA ATAGTTTTGT TGCCATGATT GGCAAATCTC TAGAATTCTT ATTTAGGCCT TTAGGTTTTT CATGGCAAAC AGTTTCCGCA CTTATATTTG GTGGTGTAGC AAAAGAAATT ATAGTATCAT CATTCTCACA ATTCTACAAC GGTATTGAAA ACGTAGTGCT TTCACCTGCT ACAGCAGCGA CGTTGATGGT ATTTGTTCTA GGTTACATAC CTTGCTTTGC AACACTTGCA GCTATAAAGG CGGAAACAAA TAGTAACAAA TACACGTTGT TTGCGATACT TTATAGTTTA ACCATTTCTT ATTTTATCGC ATTTTTGGTT AATATTTCTT GGAGGCTGTT ATCATGA
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Protein sequence | MVITVGLLGN PNVGKTSLFN KLVGARQYVA NWPGVTVTRI EGATSYRDYT LHFVDLPGVY SLSATSLDEK VTRDFLLFTP PNVTVVVIDS MTPEQGMYLL LESLELGLNV VAVFNTIDEA KKNGINIDKE ALQTFLGVPV VLTSAHTGEG IDELKETIIN SFKKVTRTKL FEYGEEIENL IKKVENCVSN EYNKRFMAIK YLENDKFVRE LINNCDFTTD ESIATEIAKK RYEYITAIIS RCFTKSNNLL STMEALDHVL THKYLGIPIF ISLIYLAFNF TFKTSEPLVG LLEFLFGKLV EFIGNDTMFK SLISDGIING VGSVLAFIPS IFALFFALGI MEESGYLPRI AFIMDKLMYS LRLTGRSFMT LLLGFGCNVS SIMAARGLSD ERERITTILV SPFISCNARI PVYLMIIGVA FSQYKAEAFF LIYLLSIVLT AISSRIVNKV ILKGETVPFI MELPRYRLPK LSNIAVYMWN RGKHFIEKAG TIIFAASIIV WALSYFPDPN NIENSFVAMI GKSLEFLFRP LGFSWQTVSA LIFGGVAKEI IVSSFSQFYN GIENVVLSPA TAATLMVFVL GYIPCFATLA AIKAETNSNK YTLFAILYSL TISYFIAFLV NISWRLLS
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