Gene Fnod_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0217 
Symbol 
ID5452991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp219602 
End bp221167 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content35% 
IMG OID640873964 
Productaminotransferase class I and II 
Protein accessionYP_001409741 
Protein GI154248916 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTTCAT TCGATGAAAT TGTTAATCGC AGGGGAACAG ATAGTTTTAA GTGGGATATG 
ATTTTAAATA TACACGGTGA TGATATACTC CCTATGTGGG TTGCAGATAT GGATTTTAAA
ACTTCGGAGA AGATTATAAA AGCACTTATC GATAGGGCAA ATCACGGTAT CTTTGGTTAT
ACCTACCGCT CGGAAGAATA TTACGAAGCA ATCACTAACT GGTACAAGTC AAGGTACGAG
GTTGAAATTG AAAAAGAGTG GATTGTTAAT GGTCCAGGGG TTGTCCCTAT GATATCGTTC
GTAATAAATA TATTCACACA GCCCGGAGAC AAAGTCATCA TACAAACACC AGTTTATCCA
CCTTTTTTCA GAGTAGTTGA AAACAACGGA AGAAAAATAG TTGAAAATAA ACTTATCAAA
AAAGATGGAA AATGGCTAAT AGATTATGAA AATCTCGAAA AATCAGTAGA TAATAGAACG
AAAATGTTAA TCCTCTCAAA CCCACATAAT CCGGTTGGAA GAGTATGGAG TATCGAAGAA
CTCACAAAGT TATACGAAAT AGCAAGGAGA TATAATCTTG TAATCGTGTC TGATGAAATC
CACGGCGATA TCGTCTATAG TCCCTCCAAA TTCACAAGTT TTTTAAAAAT AGCGAAAGAT
AATGTTATCG TACTGAATTC ACCAGGGAAA ACGTTTAATA TAGCCGGATT GCCAAATGCG
TACGGTATCA TTCCAGATAA AGCTTTAAGG CAGGCTTATA AAAATTACAT CGAAAACCTT
GAGCTTTTAA TTGGAAACAT TTTTTCTTTA GAGGCATTGA AATCTGCTTA CAATTCACCT
GAATGGGTAG ATGAGTTAGT TGAGTATTTA AAAAACAACA GAGATTACGC TTATAAATAC
ATTAAAAGGA ATTTACCACT TCTTGAACCG TCACTTCCGG AAGGTACTTA CCTTATGTGG
ATCGATTGTT CAAAAGCTAA CTTGGAAAAT CCATACGAAT TCTTTTTAAA AAATGCACGC
GTTTATTTAA ACGATGGTGC AGAGTTTGGT GATAAAAATT GTGTCAGGCT CAATTTTGCA
TGTCCTAGGA GCCTGTTAAA TGATGGACTT GAAAGAATGA AAAAAGCGTA TGACAACGCC
TTAGAATTTG AGGCATTTAG ATTACCAGAT GAAAGGTTTG AGATATGTCG TAATATAAGA
GAAGAAGTAT TCGTAAATGA ACAAAACATA GATAAAGAGC TTGAAATAGA TGGAAAAGAT
GAAGAAGCCA TTCACTTTAT TTTAAAGCAC TTCTCAAAAC CCGTTGCGGT AGCGAGGGCA
AGAGATATAG GAGATTACTG GAAAATAGAA CGTGTTGCTG TACTTTTGAA TTATCGTGGG
TACGGATATG GAAAGATGAT AATGGAGCAC ATTGAAATGT TTCTAACAAG TTTGGAAAAT
AAAAAGATCG TCCTAAACGC TCAAAAACAG GTTAAAGACT TTTATGAAAA ACTGGGATAT
AAACAAGTTG GGGAAGAATT TTACGAAGCC GGTATACCAC ATGTAAGAAT GGAGAAAAGA
GTATGA
 
Protein sequence
MSSFDEIVNR RGTDSFKWDM ILNIHGDDIL PMWVADMDFK TSEKIIKALI DRANHGIFGY 
TYRSEEYYEA ITNWYKSRYE VEIEKEWIVN GPGVVPMISF VINIFTQPGD KVIIQTPVYP
PFFRVVENNG RKIVENKLIK KDGKWLIDYE NLEKSVDNRT KMLILSNPHN PVGRVWSIEE
LTKLYEIARR YNLVIVSDEI HGDIVYSPSK FTSFLKIAKD NVIVLNSPGK TFNIAGLPNA
YGIIPDKALR QAYKNYIENL ELLIGNIFSL EALKSAYNSP EWVDELVEYL KNNRDYAYKY
IKRNLPLLEP SLPEGTYLMW IDCSKANLEN PYEFFLKNAR VYLNDGAEFG DKNCVRLNFA
CPRSLLNDGL ERMKKAYDNA LEFEAFRLPD ERFEICRNIR EEVFVNEQNI DKELEIDGKD
EEAIHFILKH FSKPVAVARA RDIGDYWKIE RVAVLLNYRG YGYGKMIMEH IEMFLTSLEN
KKIVLNAQKQ VKDFYEKLGY KQVGEEFYEA GIPHVRMEKR V