Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0199 |
Symbol | tsf |
ID | 5452370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 203998 |
End bp | 204591 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640873946 |
Product | elongation factor Ts |
Protein accession | YP_001409723 |
Protein GI | 154248898 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000300429 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTA GTGCACAAAT GGTTAAGGAA CTTAGGGAAA GAACCGGCGC AGGTATGATG GATTGTAAAA ACGCACTTGC TGAAGCAAAC GGCGATTTTG AAAAGGCTAT AGAAATTCTT AGGAAAAAAG GACTGGCAAA AGCAGCTAAG AAAGCTGGAA GAGAAACAAA AGAGGGTCTT ATCATCTCTT ACGTTCACCA CAATGGCAAA ATAGGAGTTT TACTTGAACT CAACTGTGAA ACAGACTTCG TTGCGAGAAC AGATGACTTC AAAGAACTTG GTAACAAAAT CGCTATGCAC ATCGCAGCGA TGTCACCAAG ATGGGTTACA AGAGAAGAAG TACCAGCTGA TGTAATTGAA AAAGAAAAGG AAATATACAG AGAACAACTC AAAGATTCAG GAAAACCGGC GCAAGTTATT GAAAAAATTA TCGAAGGAAA GCTTGAAAGC TTCTATCAAG ACAACTGCTT ACTTGAACAA AAATTTGCTC TCGACCAAAA TGTAACAATT AAAGATATGA TTCAACAAGC AATCGCGAAG ATTGGAGAAA ACATCCAAGT TTCAAGATTT GTTAGAATGC AAATCGGGGA ATAA
|
Protein sequence | MEISAQMVKE LRERTGAGMM DCKNALAEAN GDFEKAIEIL RKKGLAKAAK KAGRETKEGL IISYVHHNGK IGVLLELNCE TDFVARTDDF KELGNKIAMH IAAMSPRWVT REEVPADVIE KEKEIYREQL KDSGKPAQVI EKIIEGKLES FYQDNCLLEQ KFALDQNVTI KDMIQQAIAK IGENIQVSRF VRMQIGE
|
| |