| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0198 |
|---|
| Symbol | |
|---|
| ID | 5452225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 203241 |
|---|
| End bp | 203963 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640873945 |
|---|
| Product | HisJ family histidinol phosphate phosphatase |
|---|
| Protein accession | YP_001409722 |
|---|
| Protein GI | 154248897 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
|---|
| TIGRFAM ID | [TIGR01856] histidinol phosphate phosphatase HisJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000574159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAA TAATTGCTGA TTATCACATT CATAGTAATT ATTCACCGGA TTCCAATAGC
ACTATAGAAG AAATATTGGA AACGGCAAGA GAAAAGAGGA TTGAACATAT AATTATTACC
GACCATTATG AGTTAGCCGA TAGCCATTTC AACGTTATAG ATATTGAGAC ATATCGAAAA
GAAATGGAAA AATACTCGCT ACCTGTTGGC GTAGAACTTG GTTGGGATGG CATAAAAGAA
CTCAACATAG ATACGACAAA ATTTGATTAT GTATTACTTG CACATCACTA CGTGGAAGAA
CCTATAACGC AGGAAAGTTA TAAGAATTAC TTATTAAGGT TGCTAGATAT TGTAAAACGA
TTCGACAGTT ACCATGCGTT GGCACATTTG GACTTTCCAA GAAGATACCA TCCGCAAAGA
GAAGAATTTT CAAAAGAATT GTACGATATA ATAACCGAAA TACTAAAAAT AGTTATATCA
AATGGAAAAA TGTTAGAGGT TAACGTTTCA CCTATCAAAC TGTACGGTGA ACCAAATCCA
AGTATCGATA TTCTAAAGTT GTATAAATCG CTTGGTGGGA GGAATATAAC GATAGGCTCT
GACGCGCATA AGTTGGAAGA CATTGGCAAA GGAATAGAAA AAGGTATTGA AATACTTTCG
GAATTAGGTT ACAATTATAT CTTGGTGTTA GATACTGAAT GGCGAGAGGT TAAGATAAAA
TAA
|
|---|
| Protein sequence | MRKIIADYHI HSNYSPDSNS TIEEILETAR EKRIEHIIIT DHYELADSHF NVIDIETYRK
EMEKYSLPVG VELGWDGIKE LNIDTTKFDY VLLAHHYVEE PITQESYKNY LLRLLDIVKR
FDSYHALAHL DFPRRYHPQR EEFSKELYDI ITEILKIVIS NGKMLEVNVS PIKLYGEPNP
SIDILKLYKS LGGRNITIGS DAHKLEDIGK GIEKGIEILS ELGYNYILVL DTEWREVKIK
|
|---|
| |