Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0192 |
Symbol | |
ID | 5452268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 195456 |
End bp | 196649 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873939 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001409716 |
Protein GI | 154248891 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA ACAAAATAAC ACAAGCTGTT CAAAATACAA ATTTCCAAAA TCAAGATGAA CAAAAAGAGG TTATCTTAAG GATAGATAAT CTTGTTAAAC ACTTTCCTAT CAAAGCTGGA GTTTTTAAAA GAATAGTTGC TTGGGTAAAA GCCGTTGACG GTGTGAGTTT TGAAGTTTAT AAAGGTGAAA CAGTTGGTCT TGTCGGTGAA TCTGGCTGTG GGAAAACAAC AGTTGGTATG ACACTTTTGA GACTTTACGA ACCCACTTCA GGTAGAATTA TAGTGAATGG TGAAGATACA ACACACTATT TCTTACCTTC ATGGAAGGCT AAAAGATACG TACAAAAGAC ATACATCGAA AAATTCAGAA ATAGTGGCTT TACTCCAAAA GACGACGTTG ATACTAAATA TTTTAAAATA TTCAAGGAAA AAGGCGAAGA AGGGCTAATT AAATACCTTG TTGATGATTT GGAAGAAAAG CGATTACAAT TCAGAAGAGA TATCCAAATA GTTTTCCAGG ATCCATACAG TTCGCTTGAT CCAAGAATGC GTATAAAAAA TATCCTTGCC GAAGGTCCTT TAGCTCACAA AATGATTACG AAATCACAGG CAATTGATAA AGTTGGAAAA GCACTTGAAG AAGTTGGAAT TCACCCGACA CACATGTACA GATTCCCACA CGAATTTTCC GGTGGTCAGA GACAGAGAAT TGGTATAGCA AGAGCTTTAC TAATGAATCC AAAGCTTATA ATCGCAGACG AAGCTGTTGC CGCACTTGAC GTTTCAATCA GATCGCAGGT TATAAACCTC ATGATGGATT TACAAAAAGA ACATAACTTA ACGTATCTTT TCATATCGCA CGATTTGTCG TTGATTAAAT ATATTTCCAG TAGAGTTGTT GTTATGTACC TTGGAAAGGT TGTTGAGACT GCGCGTAAAA AAGACTTGTT CGATGAACCT TTGCATCCAT ATACAAAAGC ACTTATGAGT GCTATACCAG TTCCAAACCC AGAGTTTAAA AAACAAAGAA TAATACTCCA AGGAGACGTT CCAAGTCCGG TTAATCCACC AAGTGGATGT CCATTCCACC CAAGGTGTCC AGTTGCAAAA CCAATTTGTT CAAAAGAAAA ACCTGAGCTA AGGGAAATTA AACCTGAACA CTTCGTTGCT TGTCACTTCC CAGGAAGTTT ATAA
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Protein sequence | MSENKITQAV QNTNFQNQDE QKEVILRIDN LVKHFPIKAG VFKRIVAWVK AVDGVSFEVY KGETVGLVGE SGCGKTTVGM TLLRLYEPTS GRIIVNGEDT THYFLPSWKA KRYVQKTYIE KFRNSGFTPK DDVDTKYFKI FKEKGEEGLI KYLVDDLEEK RLQFRRDIQI VFQDPYSSLD PRMRIKNILA EGPLAHKMIT KSQAIDKVGK ALEEVGIHPT HMYRFPHEFS GGQRQRIGIA RALLMNPKLI IADEAVAALD VSIRSQVINL MMDLQKEHNL TYLFISHDLS LIKYISSRVV VMYLGKVVET ARKKDLFDEP LHPYTKALMS AIPVPNPEFK KQRIILQGDV PSPVNPPSGC PFHPRCPVAK PICSKEKPEL REIKPEHFVA CHFPGSL
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