Gene Fnod_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0166 
Symbol 
ID5453289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp170466 
End bp171047 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content34% 
IMG OID640873913 
ProductTetR family transcriptional regulator 
Protein accessionYP_001409690 
Protein GI154248865 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.141555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAAA GAATCCGCGA AAGCAACAAA ACTAAGGAAA AAATTATAGA TGCTGCACGT 
AAATTATTCT CTGAGAAAGG TTTTGATGGT GTTAGTATGG AGGACATTGC GCAAGCCTCT 
GGTGTGCGCA AGTCCCTTAT TTACTATTAT TTTCCAAGCA AGGAGATCCT CTTTGAAGAA 
ATCTGGATTA ATGTTATAGA TGAACTTGAA AAAGAGGTTT TCTCGGAAGT AGATAATGAA 
AGTAGTATAT CAAGAGCTAT AAAAAGATTG ATAAAAAAGT ATGTCGAATT CGCTATGAAC 
AAGGAGGAAA TAAGTAAACT AATAGCAAGG GAAAGACTGA ATGTGCTTGA AAGTGAAAAT 
GGACTTCATA ATGCAAAAAG TAGGTATGAA AGACTTTTAC AAAGAGTGGA GAAAATCTTT 
GAAAGGGGTA AAAACGAGAA TGTTTTGAAT GATATAGAAC CATCAACAGC TACAGAGATT 
ATATCTTCAG TTGATGCTGT ACCAAGAAGG GGTTTACTTA AGAGTATCGA AGAATTTCTA 
ATTAAGGTCA TTTTGAAAGA TAAACCTGAA CCTCAAAAGT GA
 
Protein sequence
MSERIRESNK TKEKIIDAAR KLFSEKGFDG VSMEDIAQAS GVRKSLIYYY FPSKEILFEE 
IWINVIDELE KEVFSEVDNE SSISRAIKRL IKKYVEFAMN KEEISKLIAR ERLNVLESEN 
GLHNAKSRYE RLLQRVEKIF ERGKNENVLN DIEPSTATEI ISSVDAVPRR GLLKSIEEFL 
IKVILKDKPE PQK