Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0129 |
Symbol | |
ID | 5452792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 129941 |
End bp | 131410 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640873876 |
Product | histidine ammonia-lyase |
Protein accession | YP_001409653 |
Protein GI | 154248828 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGTAA TCGATGGTGA GCACTTAAGC TTAGAAGATG TACACAATGT AAGTAGAAAA TACGAATTAG TCTCTATTTC AAATGAAGCA TACAAAAAAA TGCGAGATAG TCGAAAAACA ATAGAAAAGG TTTTAGAAAT TGGAGAACCT GTGTATGGTA TTAATACAGG ATTTGGTGCT TTAGCTAATG TAAGAATTTC AAAAGATAAA CTTAGAGATT TGCAAAGAAA TATAGTTCTT TCTCATTCAG CTGGAATTGG AGAGTACTTA CCAGAAGATA TTGTCCGTGC AATGATTTTA ATACGAGCAA ACGCACTCGC AAAAGGTTAC AGTGGAGTAA GACCCGTGAT TGTAGAAAAA CTTGTAGAAC TCCTAAACAA AAAAATTACA CCTTTGGTAC CTGAAAAAGG TTCCGTTGGT GCAAGTGGTG ACTTAGCTCC TCTTTCCCAT ATAGCAATGA GTATAATAGG AGAAGGAAAA GTCTTTTACA ACGGAAAAAT TATTGATATA AATAAAACTG ACTTTGTTCC TATAGAATTA GAAGAAAAAG AAGGGTTAAG TCTTATAAAC GGTACACAAT TCATGGCCGC ACATTTAGCA CTCATCGTGC GTGATTTAGA AAAGTTAATG AAATTAGCAA CACTTGTAGC TGCTTTGTCA GTAGACGTAC TTTTGGGCAC TCCAAAAGCT TTCGATGAAA GAATCCAACT CGCAAGACCG CATACTGGAC AAATTAAAAT CGCTCAATGG CTAAGGGAAT TCCTTGATGA AAGTGAACTC AGAGAAAGTC ATAAAAAATG CCCAAAAGTT CAGGACACGT ACACATTAAG GACTATCCCC CAAGTTTACG GTGCAGTATA CGATACTATC CAATGGGTCA AAGAAATTGT AATAAGGGAA ATTAACTCAG CAACTGATAA TCCGTTAGTT TTCGGTGATG AGATATTAAG TGGTGGGAAT TTCCATGGTG AGCCTCTTGC ACTATGCGCA GATTACCTTG CAGTTGCACT TACTTCCATG GGAAACATGA TTGAACGGAG AATAGATAGG ATTGTTAATC CAAAGGTCAA CGAAGGTTTA CCACCATTCT TAGCAGGTGG TGAAGAAGGC TTAAATAGTG GTTACATGAT ATGGCAATAT ACCGCCGCAG CTTTATGTAA TGAAAACAAA GTACTTTCTC ATCCGGCAAG CGCCGACACA ATACCCACTT CCGCTTATCA AGAAGATCAT GTGAGTATGG GGGCAAACGC TGTAAGAAAA TTGAGGAGAG TATACGAAAA TTTAGTAAGC TTAATATCAA TAGAAGCTAT GCTTGGAAGC ACCGCATTAT ACTACAGACG TCCTTTGAAA AGTTCTGAAC AAATCGAAAA ATTTTATGGT TTAATTGATG TAAAACCAGG TAATGACAGA TTTTTTGGTG ATGATTTTGA GCGTGTAAAA AATACAATAG TTAGGGAGGT GCTTTCATGA
|
Protein sequence | MIVIDGEHLS LEDVHNVSRK YELVSISNEA YKKMRDSRKT IEKVLEIGEP VYGINTGFGA LANVRISKDK LRDLQRNIVL SHSAGIGEYL PEDIVRAMIL IRANALAKGY SGVRPVIVEK LVELLNKKIT PLVPEKGSVG ASGDLAPLSH IAMSIIGEGK VFYNGKIIDI NKTDFVPIEL EEKEGLSLIN GTQFMAAHLA LIVRDLEKLM KLATLVAALS VDVLLGTPKA FDERIQLARP HTGQIKIAQW LREFLDESEL RESHKKCPKV QDTYTLRTIP QVYGAVYDTI QWVKEIVIRE INSATDNPLV FGDEILSGGN FHGEPLALCA DYLAVALTSM GNMIERRIDR IVNPKVNEGL PPFLAGGEEG LNSGYMIWQY TAAALCNENK VLSHPASADT IPTSAYQEDH VSMGANAVRK LRRVYENLVS LISIEAMLGS TALYYRRPLK SSEQIEKFYG LIDVKPGNDR FFGDDFERVK NTIVREVLS
|
| |