Gene Fnod_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0081 
Symbol 
ID5452568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp87016 
End bp88125 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content37% 
IMG OID640873827 
Productamidohydrolase 
Protein accessionYP_001409605 
Protein GI154248780 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.348917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAT CACCTATCGA ACTCAGACAT AAGCTTCATA GCAATCCCGA ATTAGCTTTT 
AATGAATATA AAACACAAAA CATCTTGATA CAGTCTCTTG AATCTTTGGG GTTAAGACCT 
ATTATCATAG CAAAGACGGG ATTAATTCTC CACATAGAGA AAGATAAAAC CAAACCTTCG 
ATATTGTACA GAGCTGACAT GGACGCACTT CCACTAGTTG AAGAAACAGG ATGTGAGTTT 
TCATCAACAA ATGGAAATAT GCATGCATGT GGTCATGATA TACACATGGC GATTATGTAT 
GGAGTTATAA AGGAGATAGT TGAAAAAGAT ATTCCAGGCA ATTATGTATT TGTCTTTCAA 
CCTGCTGAAG AAACAATAGG TGGCGCAAAG TACGTTATCG ATGAGATGCG AGAAAAATAC 
AAAGTAAAAT ACGCAACAGC ACTCCATGTA ACTGATGAGT ACAAGCTTGG GGAGTTCGCT 
TCAACTGAAG GTACACTGTT CGCATGTGCT ATGGAAATTA CGGCAAAATT CAAAGGTTTA 
TCTGCACATA TTGCTCAAAA ACATAGAGGA ATAGATGCGT TAAAACATGC TGTAGAATTC 
CTACATGAGT TTTATCATTC AAACATCGAT ACCAACGAAT ATGGAAAAAG AGTTTTGACT 
GGTTTTGGAA AAATGTTTGC TGGAAATGTA AGAAACGCCG TTGCAGATTA CTCAGAAGTT 
CAAGGCTCCA TTAGGGGCGA GACACTTGAA ATAGTCCTTC AAACATTTGA AAAGATATCA 
CAAAATGCAC AAAAATATAA TGGAACGATA GAAAAAGGGA GCTTATATCC ACCTGTCGTA 
AACAATAGCA AACTTGTTGA GAAATTCCGC GATTTCGTGT CGAAATCTGG ATTAAACTTT 
ATAGATTGTG GTATGAAATA CACAGGGGAG GATTTTGGAT TTTTCACCAT GAAATATCCA 
TCACTGATGT TCTGGGCAGG AGTGAGAACT AACGATATCC AATACGGATT ACATAATCCC 
AAGTTCCTCC CATCGGATGA GGTTATTCCA TTTTTGGTTG ATTTTATGGT AAAATGGCTA 
ATAGAATTAT CTCAGGTAAG CATTCATTAA
 
Protein sequence
MAISPIELRH KLHSNPELAF NEYKTQNILI QSLESLGLRP IIIAKTGLIL HIEKDKTKPS 
ILYRADMDAL PLVEETGCEF SSTNGNMHAC GHDIHMAIMY GVIKEIVEKD IPGNYVFVFQ 
PAEETIGGAK YVIDEMREKY KVKYATALHV TDEYKLGEFA STEGTLFACA MEITAKFKGL 
SAHIAQKHRG IDALKHAVEF LHEFYHSNID TNEYGKRVLT GFGKMFAGNV RNAVADYSEV 
QGSIRGETLE IVLQTFEKIS QNAQKYNGTI EKGSLYPPVV NNSKLVEKFR DFVSKSGLNF 
IDCGMKYTGE DFGFFTMKYP SLMFWAGVRT NDIQYGLHNP KFLPSDEVIP FLVDFMVKWL 
IELSQVSIH