Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0063 |
Symbol | |
ID | 5451849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 69205 |
End bp | 70395 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640873811 |
Product | aspartate aminotransferase |
Protein accession | YP_001409589 |
Protein GI | 154248764 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCAA AAAGGGCAGT TGAAACACCC GCAAGTCCAA TAAGAAGATT GGTCCCGTAC GCAGACGAAG CTAAAAAAAG AGGTATAAAT ATTTACTATC TCAACATAGG ACAGCCGGAT ATAAAGACTC CAAGCGTGTG GTACGAATAT ATCGATAAAT ACAAACCAGA AGTCGTTGCA TACACTCATT CTCAGGGTCT TTTAGAACTC AGGGAAGCTT TTTCAAAATA CTACGCAAGG CATAACATAC ACGTGAGCGC CGACGAAATA ATGGTAACAA ACGGTGGAAG CGAAGCGATA ATGTTTGCTC TTGGTGTCGT ATGCGACCCA GGTGATGAGG TTATCACAAT AGAACCATTC TACGCAAATT ACCTTGGATT TGCTTCCTAT CTAAATGTCA AACTTGTTCC CGTGACTGCC CACACTGAAG ACGGCTATCG ACTGCCGCCG ATGAGTGAAT TTGAAAAGGT TGTCAGCCCA AAAACGAAAG CTATTCTCTT CTCAAACCCG TCGAATCCAA CGGGCACAGT CTACACCTAC GAAGAGATGA AGCAAATTGT TGAATTCGCA AAGAAGCATA ATCTTGTGAT AATCTCGGAC GAAGTGTACA GGGAATTCAC ATTCGACGGC AGGAAACACA TATCAGTATT TCATTTCGAA GGAATCGAAG AACAGACGAT AATGGTTGAC AGTATATCGA AAAGGTACAG CGCCTGCGGC GCAAGGATAG GAACGTTGGT AACCAAGAAC AAAGAATTTT ACAAAAGCGC TCTCAAATTT GCACAGGCAA GGCTTTGTCC AGCGGAGACA ACACAATTCG GTGCTATTGG ATTGCTTACA CTTGGCGAGG AATACACAAA TTCAGTGAGG GATGAATACC AAAAAAGAAG AGACGCAACA TACGAAGCGA TGAAAGAAAT CCCTGGGGTA GTTGTACACA AACCTGAGGG AGCGTTCTAC CTCTCTGCAA AGCTTCCAGT TGACAATGCG GAAGACTTTA TAATCTGGAT GCTCAAAGAA TTCAACGTTG ACGGAAAAAC GACGATGGTA TCACCGCTCA GCGGATTCTA CGCAACGCCA GGAGCAGGAA TGAGTGAAAT AAGGATAGCG TACGTACTTG AAGCCGAAAA GCTCGCAGAC GCCGTGAGGA TACTTGGGGA AGGGATAAGG GAATATAATA AAAGAAAATA A
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Protein sequence | MVSKRAVETP ASPIRRLVPY ADEAKKRGIN IYYLNIGQPD IKTPSVWYEY IDKYKPEVVA YTHSQGLLEL REAFSKYYAR HNIHVSADEI MVTNGGSEAI MFALGVVCDP GDEVITIEPF YANYLGFASY LNVKLVPVTA HTEDGYRLPP MSEFEKVVSP KTKAILFSNP SNPTGTVYTY EEMKQIVEFA KKHNLVIISD EVYREFTFDG RKHISVFHFE GIEEQTIMVD SISKRYSACG ARIGTLVTKN KEFYKSALKF AQARLCPAET TQFGAIGLLT LGEEYTNSVR DEYQKRRDAT YEAMKEIPGV VVHKPEGAFY LSAKLPVDNA EDFIIWMLKE FNVDGKTTMV SPLSGFYATP GAGMSEIRIA YVLEAEKLAD AVRILGEGIR EYNKRK
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