Gene Fnod_0053 details

Gene Information

• Locus tag: Fnod_0053
• ID: 5451684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 57450
• End bp: 59321
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640873803
• Product: indolepyruvate ferredoxin oxidoreductase
• Protein accession: YP_001409581
• Protein GI: 154248756
• COG category: [C] Energy production and conversion
• COG ID: [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
• TIGRFAM ID: [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAGCAT TGGGTGATAT GCTGATACAA AGAGAGCCTT TTTCAGAAAT TGTTATAGGC 
AATACTGCAA TTGTTCGTGC CATGGTGGAA AGTGGCGTTA AAGTTGTTAC AAGCTATCCT 
GGTTCTCCTA CTCCAGAGAT TGCAGAAGCT ATAAATTCTA TCAAGAAAGA AGAGAGACCG 
TTTTATTTTG AATTTTCAAC AAATGAGAAG GTAGCTCTTG AAGTTGCTTT CGGTGCATCG 
ATAAATGGTT ACACATCATG TGTATTTTTC AAAAGTGTTG GTATGAACGT TGTTGCAGAT 
TCTTTTGTCC AACTAAGTAT GATGGAACTT CCAGGTGGGA TGGTAATTGT TATAGGGGAT 
GACCCGGGTG CAAATAGTTC ACAAAATGAG CAAGATAATA GACATTATGC AAGGTTATCT 
TATACACCGA TACTTGAACC TAAAGACGCT CAGGAAGTTT ATGAGATGTT TTTAAAGGCT 
GTCGAATATT CTAAGAAGTT ACGTTCACCA GTAATTTTGA GATTAACAAC TCACACGGCC 
CATTTTAAGC AAAAAGTACA CTTTGGAAGT TACGTTCCTT CGGATTTAGG ATTACCCATT 
TTCAATGTTA AGAAAAATGG TCCATATATT CCAATAGCTA ACAACGTACC CGTGATGAAG 
CGTAAAGCTT TAGAAAAATT AAGCGAATGG GGAAAAATTT CCGAAGAGTT TGCCCATACG 
TCAAAAAACA ACTCTAAGCG AGGGGTTATA ACTGCTGGGC TCCCCTATCT TTCACTTTTA 
GATGTACTTG GTGATAATGT CGAAAAAGTT GATATTTTAA GGCTTGGTAT GGTTTATCCT 
CTGCCAAGAA AAGCTATAAT TGAATTTCTA AAATCACACG AGGAAGTTAA GATTTTAGAA 
GAGCTTGATG ATTTTATTGA ACAGTACGTT AAATCAATAG CTTACGAAGA GGGTATAAAT 
ACGAAAATAA TCGGGAAGAT TGATTTAGAC GATTGGATTG GTGAATATAC ACCCGAAAAG 
GTGAAAATCG TTCTGAAAAA AGTATGGCCT GATTTGGTTT ACGAACCTCA CAAAAAAGTT 
GGAAACATCC GCGTTATACA AAGACCACCA CAACTTTGTC CAGGATGCGG GCACAGACCG 
GTTTTTTATG TACTTTCTAA AATCCTTTCA AAGGATGACA TATCCGTTGC AGACATAGGA 
TGCCATACAT TAGGATTTTT GGAACCGTAC GAAGTTGGTC AGGTTTTATT ATCGATGGGA 
CATTCCACAG GTACAGCCTC AGGTCTGAGT TTGTTCAACA AAACGAGAAA GGTTGTTGCG 
TTTTTGGGTG ATTCGACATT CTTCCACGCA GGCCTCCCTG GAATAATCAA TGCCGTTTTC 
AACAACCATA ATTTCACACT TGTGGTTATG GAAAATGGCA CAACAGCTAT GACAGGTCAT 
CAAGACCATC CTGGGAGGAA AATAAGAATA AGAAATTTAT TGGAAGCTAT GGGAGTGAAG 
CATATCTGGG AAGTTGATAC ATATCAAATC GATAAGTTGG AAGAAGTTTT GAAGCAAGCG 
TTAGATACCC CTGAGTTCAA TGTTGTTATA GCTAAACACC CATGTATGCT CAAGTTTACA 
AGAGAGAGAA GAAGGAAGGG AATCGTTAAA GTACCACAGA TGAGTGTAAC GAACAAATGC 
ACGCTTGCAA GTGTGTGTAT TACAAAATTT GCCTGTCCAT CTTTCCAGAG AGATTTAGAA 
GGAAGGATAT ACGTCAATAA GGATCTTTGT ATAGGCGATG GTTCGTGTAT TGGCGTATGC 
CCAAGTGGCG CTCTTGAATT CGAGAAATTT GAAAAAGCGG ATAATACCGA AAGTGCAGGT 
GATTTAAAAT GA 

 

Protein sequence

MKALGDMLIQ REPFSEIVIG NTAIVRAMVE SGVKVVTSYP GSPTPEIAEA INSIKKEERP 
FYFEFSTNEK VALEVAFGAS INGYTSCVFF KSVGMNVVAD SFVQLSMMEL PGGMVIVIGD 
DPGANSSQNE QDNRHYARLS YTPILEPKDA QEVYEMFLKA VEYSKKLRSP VILRLTTHTA 
HFKQKVHFGS YVPSDLGLPI FNVKKNGPYI PIANNVPVMK RKALEKLSEW GKISEEFAHT 
SKNNSKRGVI TAGLPYLSLL DVLGDNVEKV DILRLGMVYP LPRKAIIEFL KSHEEVKILE 
ELDDFIEQYV KSIAYEEGIN TKIIGKIDLD DWIGEYTPEK VKIVLKKVWP DLVYEPHKKV 
GNIRVIQRPP QLCPGCGHRP VFYVLSKILS KDDISVADIG CHTLGFLEPY EVGQVLLSMG 
HSTGTASGLS LFNKTRKVVA FLGDSTFFHA GLPGIINAVF NNHNFTLVVM ENGTTAMTGH 
QDHPGRKIRI RNLLEAMGVK HIWEVDTYQI DKLEEVLKQA LDTPEFNVVI AKHPCMLKFT 
RERRRKGIVK VPQMSVTNKC TLASVCITKF ACPSFQRDLE GRIYVNKDLC IGDGSCIGVC 
PSGALEFEKF EKADNTESAG DLK