| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0049 |
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| Symbol | |
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| ID | 5451896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 52238 |
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| End bp | 53302 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640873799 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001409577 |
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| Protein GI | 154248752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.562549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAA AAATTAGTCT TAAAAATATA CTCTTAAGCA ATATAGTTCC TATTGCGTTT
TTTATTTTAA CGCTTGGTGC AGTAATCGTC GCAAAAATCC CAATATTATT TTTACTATCA
GAGATTGTTA GAAGGATAAG TCGAAATACA TTCTTAGTAT TAGCTTTGAT AATACCAGTT
GTTGCAGGAC TTGGTTTGAA CTTTGCAATC GTACTTGGAG CAATGGCCGC TCAAGCTTCG
TTATTTTTCG TAGTTGATTG GGGAATAACA GGTATCAAAG GTATATTACT TGCGATGCTT
ATGGCTAGTG TACTTTCCAT AGGATTAGGT TGGCTCGTTG GACGAACACT TAATAGGGCA
AAGGGAAGAG AAATGATTAC TTCTATGATT CTCGGATTTT TTGCAAACGG TGTTTATCAA
TTGATTTTCC TTTTCTTCAT TGGTTCGCTT ATACCTTATT CGAAAAAAGC ATTCCTTTTA
CCACAAGGTG TTGGACTTAG AAATACAGTC GACCTCTACG GAGTCGTTGA TGGAGCACTT
AACAACATAT GGATAGTAAG CATAAAATTC ATAAACGTTT ACATGATTCC TTTATTCATA
ATTGTTGGAC TATGCTTATT AATTACATTT TTACTTAAAA CTAAGCTTGG TCAGGATTTT
AAGGCAGTTG GTCAGGATAT GCACGTTGCT CAAACTGCTG GAATCAATGT TGATAAGACA
AGAATTACTG CAATAATAAT ATCAACAGTT CTTGCAGCAA TAGGTCAGAT AATATACTTA
CAAGATATAG GAACAATAAA TACATACAAC AGTCATGAGC AAATAGGTCT CTTCTCGATT
GCCGCGCTCC TAGTCGGTGG TGCAAGTACA AGAAAAGCGA ATATATGGAA CGCAATAATT
GGTGTTATCC TTTTCCACAC ACTCTTCATA GTCGCACCGA GTGCTGGAAA CAGATTATTT
GGTCAACCAC AGATTGGTGA ATTTTTCAGA GAATTTGTTG CATATGCAGT TATCGCATTT
GCACTTGCAA TGCACGGTTG GAAAACAAGA AAAGGAATAC ATTAA
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| Protein sequence | MNRKISLKNI LLSNIVPIAF FILTLGAVIV AKIPILFLLS EIVRRISRNT FLVLALIIPV
VAGLGLNFAI VLGAMAAQAS LFFVVDWGIT GIKGILLAML MASVLSIGLG WLVGRTLNRA
KGREMITSMI LGFFANGVYQ LIFLFFIGSL IPYSKKAFLL PQGVGLRNTV DLYGVVDGAL
NNIWIVSIKF INVYMIPLFI IVGLCLLITF LLKTKLGQDF KAVGQDMHVA QTAGINVDKT
RITAIIISTV LAAIGQIIYL QDIGTINTYN SHEQIGLFSI AALLVGGAST RKANIWNAII
GVILFHTLFI VAPSAGNRLF GQPQIGEFFR EFVAYAVIAF ALAMHGWKTR KGIH
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