| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0032 |
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| Symbol | |
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| ID | 5452055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 36521 |
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| End bp | 37318 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640873782 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001409561 |
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| Protein GI | 154248736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.604772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTCTA AATATATTTT TTCAACACTT TCAGTATTTT TTCATGATAA AATATCATTG
AAAGGAGATG AGAATATTAA ACTACAAAAG TACTTACAGT TGTGTGGTTT TGCAAGAAGA
AAAGCCGATG AATACATAAC ATCAAAAAGA GTGATCGTGA ACGGTAAAAC TGTAGATGAA
CCCTGGTTTG AAGTAAACGA GGATGATAAT GTTTTGGTAG ACGGAAAAAT TTTAAAACCA
AATCAATTTG AGTATTATGT TCTCCATAAA CCAAAAGATT ACGTGACGAC TCTATTCGAC
CCAAAGCAAA AAAAGACTAT AGGAGAACTT ATTAAACATA TTAAAACACC TTTGAAACCC
GCAGGAAGAC TTGATAAAGA TGCAACTGGT GTGTTAATCC TAACAAACGA TGGCGAATTA
ATAGACATTC TCACAAACGC AAAATATAGA GTAAAAAAAG AATACATTGT TAAAGTCAAA
AGTGTTGTTA GCGCTGAGGA ATTAGTAAAA TTGAAAAAAG GTATATATGA TAAAGGAGAA
TTCTTAAAGT TAGAACATTT TAAAATAATT GAGAAAAGTT CTGAATATTC AATTGTAAGA
GTAGAATTAA TAAAAGGGAA AAAACACGAG ATAAAAAGAC TTTTTAGTTC CATAGGTCAT
AACGTATTAG AATTAAAAAG AATATCTCAC GGGCCAATTT CTATTTCCCT TGTTCCAAAT
GAAGGAGATT TAAAGAAAAT AAAAGGAGAA AACCTCGAAA AACTTTTAGA GCTTAAAAAA
TTACATGTTG AAAAATAA
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| Protein sequence | MNSKYIFSTL SVFFHDKISL KGDENIKLQK YLQLCGFARR KADEYITSKR VIVNGKTVDE
PWFEVNEDDN VLVDGKILKP NQFEYYVLHK PKDYVTTLFD PKQKKTIGEL IKHIKTPLKP
AGRLDKDATG VLILTNDGEL IDILTNAKYR VKKEYIVKVK SVVSAEELVK LKKGIYDKGE
FLKLEHFKII EKSSEYSIVR VELIKGKKHE IKRLFSSIGH NVLELKRISH GPISISLVPN
EGDLKKIKGE NLEKLLELKK LHVEK
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