Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0031 |
Symbol | |
ID | 5451573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 34748 |
End bp | 36253 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640873780 |
Product | diguanylate cyclase |
Protein accession | YP_001409560 |
Protein GI | 154248735 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0530472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAG AAAGAATACT TATAAACCAA AGAATTAAAA GAATCTTTAC TAGTTCTTTG ATTATATTCT TTTTCGTCCT GATTTTATTT AGTTTCATTA CCTTAAGAAA TTTGAAAAGA AGTGTCGAAA TTGATAATCA CTTTTACTCT TCTACCATCG ATTCTATAAT TCAACTAAAT TCAGAAAAAC TTGAAATTTT AGCAGAAGAG TATTCTAAGA ATGAAAAAAT AATTAGTTTT ATAACAATGG AAAATGACCA AAAACAGCTA GATAATATAT TTAAATCTCT TATCTTAAGT CAAGATGTAG ATTTCGTAGC TATTTACTCA AATGAAAAAT CGGTTTATAT AAACTGTGAA AACAAAATTC TACATAGCTT CTTATTAACT CTGAATTTTC AGAAAAATAA TGATTTTGTT CACTCATATG AACTTTCAGA AAGTTTACTA TTCCCATTTG AGTATTACGC ATATCCTATA TTAAAAAAAG ATAGTGAAAC ACAAAAACGA AGAATTGGTA CAATACTTTT AGGAAGGTTC ATAAACATTG AAAGACTATT AGAGTTGGAA AGATTAACAG CATCAAAAAT TACTTTTGAA ACTGATCCAA AAAAAACTTT AAAACCATTC GGAATAACTT TGACTTACTC AAAACCATTG AAAAACTCAC AGAATAAAAT CATAGGATAC ATTGTAGCTC AAAAACCATC AGAAGCTTTC AAAGTGACTT TTATAAATCT ATCTATATTT ACAATTATGT TTATACTCCT ATTTATTTTC TTACTTTATA TGTCAGCATA TTTTGTAACA GACACAGTTG TGACACCTCT TCAAAAAATC GAATACGCAA TCCAAAACAA TACACCTGAT GTTATAGAAA GATACGTTTA CCAAAAAGAT GAAATTGGTG AATTATCACG AGCTATAAAA CATTACTTGG AGCAGAAAGA ACAAATTAAT ATTTATCTTA AAGAACTTGA AAGTAAAAAC GCAAGTTTGC GAATGCTAAA TGAAGAAGTT AGAAAGCTTT TGGAAAAAGA CACTCTAACA GGACTTTTAA CACGTTATGT GTTCAATTCT CAAATCGAAA GGTTATACGT TTCAAGCAAA GCTGACAAGA TACCTCTATC TGCAATTTCA ATAGATGCTG ATAATTTCAA AAAGATAAAT GATACTTACG GACATGCTGA AGGAGATGAA GTATTAAAGA AAATAGGAGA AATTATTCTA AAAAACATAA GATTAAGCGA CTTCCCAATC CGAATGGGTG GAGAAGAAAT ATTGATTCTT CTTCCAGAAG CAGATATAAA TGCTGCATAT TCGATAGCAG AAAGAATCAG AAATAAAGTT CAGGAAGAAT TTAAATCAAA ACCGTACACA GTTACAATAA GTCTTGGCGT AACACAATTA AAACCAGAAG ATACAATTGA AACCTTTTTA AAGAGAGCAG ACGACGCACT TTATGTTTCA AAAACTAATG GAAAGAACCA AACAACAATA TTTTGA
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Protein sequence | MKEERILINQ RIKRIFTSSL IIFFFVLILF SFITLRNLKR SVEIDNHFYS STIDSIIQLN SEKLEILAEE YSKNEKIISF ITMENDQKQL DNIFKSLILS QDVDFVAIYS NEKSVYINCE NKILHSFLLT LNFQKNNDFV HSYELSESLL FPFEYYAYPI LKKDSETQKR RIGTILLGRF INIERLLELE RLTASKITFE TDPKKTLKPF GITLTYSKPL KNSQNKIIGY IVAQKPSEAF KVTFINLSIF TIMFILLFIF LLYMSAYFVT DTVVTPLQKI EYAIQNNTPD VIERYVYQKD EIGELSRAIK HYLEQKEQIN IYLKELESKN ASLRMLNEEV RKLLEKDTLT GLLTRYVFNS QIERLYVSSK ADKIPLSAIS IDADNFKKIN DTYGHAEGDE VLKKIGEIIL KNIRLSDFPI RMGGEEILIL LPEADINAAY SIAERIRNKV QEEFKSKPYT VTISLGVTQL KPEDTIETFL KRADDALYVS KTNGKNQTTI F
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