Gene Fnod_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0031 
Symbol 
ID5451573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp34748 
End bp36253 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content29% 
IMG OID640873780 
Productdiguanylate cyclase 
Protein accessionYP_001409560 
Protein GI154248735 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0530472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG AAAGAATACT TATAAACCAA AGAATTAAAA GAATCTTTAC TAGTTCTTTG 
ATTATATTCT TTTTCGTCCT GATTTTATTT AGTTTCATTA CCTTAAGAAA TTTGAAAAGA
AGTGTCGAAA TTGATAATCA CTTTTACTCT TCTACCATCG ATTCTATAAT TCAACTAAAT
TCAGAAAAAC TTGAAATTTT AGCAGAAGAG TATTCTAAGA ATGAAAAAAT AATTAGTTTT
ATAACAATGG AAAATGACCA AAAACAGCTA GATAATATAT TTAAATCTCT TATCTTAAGT
CAAGATGTAG ATTTCGTAGC TATTTACTCA AATGAAAAAT CGGTTTATAT AAACTGTGAA
AACAAAATTC TACATAGCTT CTTATTAACT CTGAATTTTC AGAAAAATAA TGATTTTGTT
CACTCATATG AACTTTCAGA AAGTTTACTA TTCCCATTTG AGTATTACGC ATATCCTATA
TTAAAAAAAG ATAGTGAAAC ACAAAAACGA AGAATTGGTA CAATACTTTT AGGAAGGTTC
ATAAACATTG AAAGACTATT AGAGTTGGAA AGATTAACAG CATCAAAAAT TACTTTTGAA
ACTGATCCAA AAAAAACTTT AAAACCATTC GGAATAACTT TGACTTACTC AAAACCATTG
AAAAACTCAC AGAATAAAAT CATAGGATAC ATTGTAGCTC AAAAACCATC AGAAGCTTTC
AAAGTGACTT TTATAAATCT ATCTATATTT ACAATTATGT TTATACTCCT ATTTATTTTC
TTACTTTATA TGTCAGCATA TTTTGTAACA GACACAGTTG TGACACCTCT TCAAAAAATC
GAATACGCAA TCCAAAACAA TACACCTGAT GTTATAGAAA GATACGTTTA CCAAAAAGAT
GAAATTGGTG AATTATCACG AGCTATAAAA CATTACTTGG AGCAGAAAGA ACAAATTAAT
ATTTATCTTA AAGAACTTGA AAGTAAAAAC GCAAGTTTGC GAATGCTAAA TGAAGAAGTT
AGAAAGCTTT TGGAAAAAGA CACTCTAACA GGACTTTTAA CACGTTATGT GTTCAATTCT
CAAATCGAAA GGTTATACGT TTCAAGCAAA GCTGACAAGA TACCTCTATC TGCAATTTCA
ATAGATGCTG ATAATTTCAA AAAGATAAAT GATACTTACG GACATGCTGA AGGAGATGAA
GTATTAAAGA AAATAGGAGA AATTATTCTA AAAAACATAA GATTAAGCGA CTTCCCAATC
CGAATGGGTG GAGAAGAAAT ATTGATTCTT CTTCCAGAAG CAGATATAAA TGCTGCATAT
TCGATAGCAG AAAGAATCAG AAATAAAGTT CAGGAAGAAT TTAAATCAAA ACCGTACACA
GTTACAATAA GTCTTGGCGT AACACAATTA AAACCAGAAG ATACAATTGA AACCTTTTTA
AAGAGAGCAG ACGACGCACT TTATGTTTCA AAAACTAATG GAAAGAACCA AACAACAATA
TTTTGA
 
Protein sequence
MKEERILINQ RIKRIFTSSL IIFFFVLILF SFITLRNLKR SVEIDNHFYS STIDSIIQLN 
SEKLEILAEE YSKNEKIISF ITMENDQKQL DNIFKSLILS QDVDFVAIYS NEKSVYINCE
NKILHSFLLT LNFQKNNDFV HSYELSESLL FPFEYYAYPI LKKDSETQKR RIGTILLGRF
INIERLLELE RLTASKITFE TDPKKTLKPF GITLTYSKPL KNSQNKIIGY IVAQKPSEAF
KVTFINLSIF TIMFILLFIF LLYMSAYFVT DTVVTPLQKI EYAIQNNTPD VIERYVYQKD
EIGELSRAIK HYLEQKEQIN IYLKELESKN ASLRMLNEEV RKLLEKDTLT GLLTRYVFNS
QIERLYVSSK ADKIPLSAIS IDADNFKKIN DTYGHAEGDE VLKKIGEIIL KNIRLSDFPI
RMGGEEILIL LPEADINAAY SIAERIRNKV QEEFKSKPYT VTISLGVTQL KPEDTIETFL
KRADDALYVS KTNGKNQTTI F