Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_5042 |
Symbol | |
ID | 5092186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 6082144 |
End bp | 6082947 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644744467 |
Product | Cof-like hydrolase |
Protein accession | YP_001197360 |
Protein GI | 146302769 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.555444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATACA AAATGCTAGT TCTCGACATG GATGATACCT TGTTGACAGA CGACCACAAA ATTTCTGATT TAAATAAAAA AGTATTATTA GAAGCGCAGG CAAAAGGTGT TCATGTTGTT TTGGCGTCCG GACGCCCAAC TTCGGCAATG ACAGTTTATG CCAAAGAACT GGAATTAGAT TTAAACGATT CCTATATGAT TTCGTTTAAC GGAGCCATTA TCAGCCGTGT TAAGGATGAT TTGGTTTTGT TTGAACAAAA ACTTACTATC GAACAAATTC ATGCATTGTA CGATTACAGT GTTAAAATGA AAACGCATAT TATAACTTAT TTAGATAATG AAATTATAAG CGAAACAGAT TCTGAGTATA TAGAAGTTGA GAAAGAAATT ACCGGCATGG TGCATCGCAA AGTGCCTAGT TTTAAAGATT ATGTTGACAG ACCGGCTGTA AAATGTATTT TATTAGAAAA TCCAGTTTAT TTAAAAGAAG TTGAAAAAGA TTTAAAACCA ACAATGCCTC ATTTAAGTGT TTCAATGTCT AAACCCTTTT TTCTGGAAGC GGCACAGCAA GGCATTGATA AAGCGGCAAG CTTGAAACTT TTGGCAGAAA AACTTTGTGT GCTTCAAAGC GAAATTATTG CAGTTGGTAA TGCAGGAAAC GACTTGACAA TGATAGAATA TGCAGGACTT GGTGTTTGGG TTGATAATGT AACGCCGGAA TTACGCGATA AGGCCGATTT AATTGTGGCT TCAAATAATA ATGACGGAGT GGCAGAAGTA GTGCAGAAAT ATATTTTAAA TTAA
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Protein sequence | MQYKMLVLDM DDTLLTDDHK ISDLNKKVLL EAQAKGVHVV LASGRPTSAM TVYAKELELD LNDSYMISFN GAIISRVKDD LVLFEQKLTI EQIHALYDYS VKMKTHIITY LDNEIISETD SEYIEVEKEI TGMVHRKVPS FKDYVDRPAV KCILLENPVY LKEVEKDLKP TMPHLSVSMS KPFFLEAAQQ GIDKAASLKL LAEKLCVLQS EIIAVGNAGN DLTMIEYAGL GVWVDNVTPE LRDKADLIVA SNNNDGVAEV VQKYILN
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