Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_5033 |
Symbol | |
ID | 5092177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 6073284 |
End bp | 6073784 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644744458 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001197351 |
Protein GI | 146302760 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGTG ATGCCCAGCG TCAGGTTTAT GAGCACATGG CTCCAAAATT GTATCGCGTC TGCAAACGAT ACCTAAAGAA AGAAGAAGAA ATCGAAGAGG CGCTTGCCGA TGCTTTCTAT ACCATATTTA CAAAATTAGA TCAGCTTAAG GAAGAAAAAG CCTTTGAAGC TTGGGCCAGA AAAATTGCCG TTAATTATTG TTTGGCATCA ATCAAGAAAA ACACAAACTT CAATATGTAT CTTGATGATG TTAAGGTTCT TTCGCAGCCT TTTACAGAAG AAATGAACGC ATTAGAAGAA GAAGATTTAC TCAATTTATT AAACCATATT CCAGACGGCT GTAAAACTGT TTTTAACCTT TTTGTTATTG AAGGTTACGG ACATAAAGAA ATTGCAGCTA TGCTTAACAT TTCTGAAGGC ACTTCAAAAT CACAATTGAA TGCCTCAAAA ACCAAGCTGA AGGAATTAGT AAATAAATTG TATTATCAAA AAGCAAAATA G
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Protein sequence | MNRDAQRQVY EHMAPKLYRV CKRYLKKEEE IEEALADAFY TIFTKLDQLK EEKAFEAWAR KIAVNYCLAS IKKNTNFNMY LDDVKVLSQP FTEEMNALEE EDLLNLLNHI PDGCKTVFNL FVIEGYGHKE IAAMLNISEG TSKSQLNASK TKLKELVNKL YYQKAK
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