Gene Fjoh_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_5009 
Symbol 
ID5094279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp6047475 
End bp6048137 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID644744434 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001197327 
Protein GI146302736 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT TAGATTACCT GGCATTTCTT GAAGATATAT TAACAGATAA CCGAAAAGAG 
AAATTTCTAA AAGTATTAGA AAATCGTACG AAGCATTTTA CCATTGCTGT CGAAGATGTT 
TACCAAATGC ATAACACGAG TGCTGTAATG CGCAGTTGTG AAGTTTTTGG AATTCAGGAA 
CTTAATATTA TCGAACAGCG TTTTGGAAAA AGGATCGATA AAGAAATCGC TTTGGGTGCT 
CAAAAATGGG TTGACATAAA CCGATTTGAT ACTGTCGACG GCTGTATTTC GTCTTTAAGA 
GATAAAGGAT ATCAAATTAT TGCGACAACG CCGCACGAAA ATGACTGCTT GATTCAGGAT 
TTTGATATTT CAAAACCAAG TGCCTTATTT TTTGGAACTG AAAAAGATGG TCTTTCGCCG 
GAAATTCTTG AAAAAGCAGA TGGTTTTCTT AAAATTCCAA TGGTAGGGTT TACAGAGAGT 
TTGAACATTT CTGTTTCGGC TGCAATTATC ATCCAAAACT TAACCAACAG ATTACGAAAT 
TCAGATATCA AATGGAAACT GTCTGATGAA GAAATACTGC AAAAACGTCT TGACTGGGCT 
AAAAATTCAA TTAGAGATAT TAAGAGAATC GAAGCACGTT ATTATCAGGA TAACCCAAGA 
TAA
 
Protein sequence
MIDLDYLAFL EDILTDNRKE KFLKVLENRT KHFTIAVEDV YQMHNTSAVM RSCEVFGIQE 
LNIIEQRFGK RIDKEIALGA QKWVDINRFD TVDGCISSLR DKGYQIIATT PHENDCLIQD 
FDISKPSALF FGTEKDGLSP EILEKADGFL KIPMVGFTES LNISVSAAII IQNLTNRLRN 
SDIKWKLSDE EILQKRLDWA KNSIRDIKRI EARYYQDNPR