| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4984 |
|---|
| Symbol | |
|---|
| ID | 5094254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 6020521 |
|---|
| End bp | 6021774 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644744409 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_001197302 |
|---|
| Protein GI | 146302711 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA CAATAGTTAC CATTGGAGAT GAAATTTTAA TTGGTCAAAT TGTAGATACA
AATTCAAATT TTATAGCCAA AGAGCTGGAT AGAATTGGTG TCGAAACGTA TGAAATGATT
TCGATAAGCG ATGATAAACA GCATATTTTA AACACTTTTG CACAATTACA GAATAAAGTA
GATGTTGTAA TTGTAACAGG CGGTCTTGGG CCGACAAAAG ATGATGTTAC CAAAAAAACT
TTCTGCGAAT ATTTTGATGA TGAACTGGTG GTAAATCCAG AAGTTTTGGC TCACGTAACA
GAACTTATCG AAGGATTTTA TAAAAGACCA ATTTCGCAGT TAAATAAAGA TCAGGCGCTT
GTTCCGTCAA AATGCACCGT TCTTCATAAT AAAATGGGAA CAGCTCCGGG AATGTGGATG
AAAAAGGAAA ACACAGTGTT TGTTTCACTT CCGGGAGTTC CGTATGAAAT GAAATATCTG
GTAGAAAACG AAATAATCCC AAAAATTGTA AAAGAATATA AACGCCCATA TATAATTCAT
AAAACCATTT TAACGTACGG TCAGGGCGAA AGTTTAGTCG CAGAACGTAT TGAAAACTGG
GAAAACAACC TGCCTGAATT TATAAAACTG GCTTATCTGC CAAATCCGGG AAGAGTCCGC
CTTCGTATGA CTGCCCGCGG AACAGATAAA GAGGTGCTTG AAAAAGCAAT AGAAGAAAAT
GTTCAGTCGC TTGATGCTAT AATTCATGAT ATTATAGTAG GTTACGAAGA AAATGAAACC
ATCGAAACTG TAGTAGGGAA ACTGCTTGCC AAACAAAATA AAACCGTTTC GACAGCAGAA
AGCTGTACAG GAGGAAAAGT TGCGTCGCTT TTGGCATCTG TTCAGGGCGC TTCTGCATAT
TTTAAAGGAA GTGTTGTTTC GTATGCAACA GAAGCAAAGG TTAATGTTTT GGGAGTTTCG
CAGGATTTAA TAGACCAGTT TTCGGTAGTA AGTGCTGAGG TTGCGGCTGC TATGGCTTTG
AATGTGAAAA ACATACTAAA AACAGACTAT GCAATTGCGA CAACCGGAAA TGCTGGTCCG
TCAAAAGGTG ACTCAGAAGC TGAAATTGGA ACTGTTTTTA TTGCTTTGGC AACACCAAAC
GGAGTAATTA CAGAAGAATT TAACTTTGGA CAACCGCGTG AAAAAGTGAT AGATAGGGCG
ACTATTAAGA GTTTAGAAAT ATTACAGAAA GAAATTTTAA AAATTGTGCA ATAA
|
|---|
| Protein sequence | MKATIVTIGD EILIGQIVDT NSNFIAKELD RIGVETYEMI SISDDKQHIL NTFAQLQNKV
DVVIVTGGLG PTKDDVTKKT FCEYFDDELV VNPEVLAHVT ELIEGFYKRP ISQLNKDQAL
VPSKCTVLHN KMGTAPGMWM KKENTVFVSL PGVPYEMKYL VENEIIPKIV KEYKRPYIIH
KTILTYGQGE SLVAERIENW ENNLPEFIKL AYLPNPGRVR LRMTARGTDK EVLEKAIEEN
VQSLDAIIHD IIVGYEENET IETVVGKLLA KQNKTVSTAE SCTGGKVASL LASVQGASAY
FKGSVVSYAT EAKVNVLGVS QDLIDQFSVV SAEVAAAMAL NVKNILKTDY AIATTGNAGP
SKGDSEAEIG TVFIALATPN GVITEEFNFG QPREKVIDRA TIKSLEILQK EILKIVQ
|
|---|
| |