Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4944 |
Symbol | |
ID | 5094214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5971726 |
End bp | 5972631 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644744369 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001197262 |
Protein GI | 146302671 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.038406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGAA AACTTTTTTG TTATCTGATC TTAGCAATTA TCATAACTTC TTGCTCAACG AATCCATATA AGACTACTGA AAAGGCATAC GACCAGCAGT TAAAGACTTT AGAAAATCAA ATTACAAGCA AAGAAGCTCA GGCAATACCG TCTATAAGTC CGGTTATTAT CGACACTACT TATGCATCGC AGCTTGGTAT TATAAAAGAT ACTTTATCAA AAACAGGTTC TACTTCTTTA TTAAACGGAA TTAGTACAGA ATGGATTGGT ACTGTAAACT TTAATTTAAG AAAACCAAGT TTTGTAATTA TTCATCATAC TGCACAGGAT TCTTTGCAGC AAACTATCAA TACATTTACA AAAACAAGAA CTCAGGTAAG TTCTCACTAT ATTATTTCTG AAAATGGAAA AGTAGTTCAA ATGCTGAATG ATTATTTAAG AGCATGGCAC GCAGGAAATT CAACTTGGGG AAAAAACACT GATTTGAATT CTTCATCTAT AGGAATTGAA CTTGATAATA ATGGTTTTAA ACCTTTTACA GAAGCTCAGA TAAGCAGTTT GGTTGCTTTG TTGACAAAAC TAAAAAAAGA TTACAACATA CCAACTCAAA ACTTTTTAGG TCATGCTGAT ATTGCACCAG GAAGAAAACA AGATCCAAGT GCTTTATTTC CGTGGAAAAC ATTAGCCGAA AAAGGTTTCG GAATCTGGCC TGACGCTGTT CTTGAAGAAG CACCATTTGA TTTTAAAATT GAACCTGCAT TAAGAATTAT TGGTTATAAC ACTAAGAATC TTTCGGCAGC AATTCAGGCT TTTAAACTGC ATTATATTCA AACCGACACA ACTGCAACGC TTGACCGCAA AACAATTGAT ACGATATATT CTATATATAA AAAACAGATT CAGTAA
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Protein sequence | MVRKLFCYLI LAIIITSCST NPYKTTEKAY DQQLKTLENQ ITSKEAQAIP SISPVIIDTT YASQLGIIKD TLSKTGSTSL LNGISTEWIG TVNFNLRKPS FVIIHHTAQD SLQQTINTFT KTRTQVSSHY IISENGKVVQ MLNDYLRAWH AGNSTWGKNT DLNSSSIGIE LDNNGFKPFT EAQISSLVAL LTKLKKDYNI PTQNFLGHAD IAPGRKQDPS ALFPWKTLAE KGFGIWPDAV LEEAPFDFKI EPALRIIGYN TKNLSAAIQA FKLHYIQTDT TATLDRKTID TIYSIYKKQI Q
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