Gene Fjoh_4944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4944 
Symbol 
ID5094214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5971726 
End bp5972631 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content33% 
IMG OID644744369 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001197262 
Protein GI146302671 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.038406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGAA AACTTTTTTG TTATCTGATC TTAGCAATTA TCATAACTTC TTGCTCAACG 
AATCCATATA AGACTACTGA AAAGGCATAC GACCAGCAGT TAAAGACTTT AGAAAATCAA
ATTACAAGCA AAGAAGCTCA GGCAATACCG TCTATAAGTC CGGTTATTAT CGACACTACT
TATGCATCGC AGCTTGGTAT TATAAAAGAT ACTTTATCAA AAACAGGTTC TACTTCTTTA
TTAAACGGAA TTAGTACAGA ATGGATTGGT ACTGTAAACT TTAATTTAAG AAAACCAAGT
TTTGTAATTA TTCATCATAC TGCACAGGAT TCTTTGCAGC AAACTATCAA TACATTTACA
AAAACAAGAA CTCAGGTAAG TTCTCACTAT ATTATTTCTG AAAATGGAAA AGTAGTTCAA
ATGCTGAATG ATTATTTAAG AGCATGGCAC GCAGGAAATT CAACTTGGGG AAAAAACACT
GATTTGAATT CTTCATCTAT AGGAATTGAA CTTGATAATA ATGGTTTTAA ACCTTTTACA
GAAGCTCAGA TAAGCAGTTT GGTTGCTTTG TTGACAAAAC TAAAAAAAGA TTACAACATA
CCAACTCAAA ACTTTTTAGG TCATGCTGAT ATTGCACCAG GAAGAAAACA AGATCCAAGT
GCTTTATTTC CGTGGAAAAC ATTAGCCGAA AAAGGTTTCG GAATCTGGCC TGACGCTGTT
CTTGAAGAAG CACCATTTGA TTTTAAAATT GAACCTGCAT TAAGAATTAT TGGTTATAAC
ACTAAGAATC TTTCGGCAGC AATTCAGGCT TTTAAACTGC ATTATATTCA AACCGACACA
ACTGCAACGC TTGACCGCAA AACAATTGAT ACGATATATT CTATATATAA AAAACAGATT
CAGTAA
 
Protein sequence
MVRKLFCYLI LAIIITSCST NPYKTTEKAY DQQLKTLENQ ITSKEAQAIP SISPVIIDTT 
YASQLGIIKD TLSKTGSTSL LNGISTEWIG TVNFNLRKPS FVIIHHTAQD SLQQTINTFT
KTRTQVSSHY IISENGKVVQ MLNDYLRAWH AGNSTWGKNT DLNSSSIGIE LDNNGFKPFT
EAQISSLVAL LTKLKKDYNI PTQNFLGHAD IAPGRKQDPS ALFPWKTLAE KGFGIWPDAV
LEEAPFDFKI EPALRIIGYN TKNLSAAIQA FKLHYIQTDT TATLDRKTID TIYSIYKKQI
Q