Gene Fjoh_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4877 
Symbol 
ID5094315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5898160 
End bp5899935 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content27% 
IMG OID644744300 
ProductAAA ATPase 
Protein accessionYP_001197195 
Protein GI146302604 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0546065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAAAA TTGTTATAAA AAATAAATAC AAATCTATAG ACGTTTGTGA GTTTGAACTT 
CCTAATTTTT CAGTTTTAAC AGGTTTAAAT GGGAGTGGTA AGACACATTT GTTAGAAGCA
ATTGCAAATA ATATAATTAG TGATGTATAT GTAAATGGAA ATAAAATTTC TTATGTAAGA
TACATTCCTT TTAATGGTTT GAATTCAGAT ATTAAAGAAG AATGTGATCC AGATGTAATC
ACAAGATGGA TAAAAAGTAT AGTGGATCCA TTTAGAAAAT CACTTGAGTC ATTAAAAGAA
AGAGGCGTAG AATTAACCGA GAGTAATTTG ATAAATTCAA GTGGTGATAT GAGTTTTAGA
TTTGCCATAA AAAAAGTTTT AGAAAAAATA GGGAAAAAAA TAGAAGATAT TACAGATGAT
GATTTTTCAA ATTATTTTGA TGCATCTATG ATTGCTCAGA ATGATTTTTT TACAGCTCAA
TTTGCTCTAA TTTTTAAAAA TTATCATAGA TTGTTTATTG AAAACGAATT AAACATATAT
TATAAATCTA AAAATATTCC TACAGAATCT GATGGTTTAT CTAATAATGA TTTCATTAAT
AGAAATGGTA TTGCACCATG GGATTTTGTA AATAATATAC TTGCCGAGAT AGATGTACCA
TATATTGTAA ATTCACCCAG TGGAACAAGA GCAGAATCTA ATTTTAAATT GAGATTAATT
AATCAAAATA ATGGAATAGA AATTTCATCA CAAGATTTGT CAACTGGTGA GAAAGTTTTA
ATGTCTTTAG CTTTAGCAAT TTATAATTCA AGTGGAATAG ATAATAAACC TGAGCTTTTA
TTGATAGATG AACCTGACGC TGCATTGCAT CCCTCCATGT CTCGAAAAAT GATTGATATA
CTTAATAATC ATATTGTAAA AGTAAGTAAG ATTCCTAGTT TGATAACTTC TCATTCACCA
ACTACAATAA TTTCGTCAGA TGGGATTTCA ATTTATCAAA TGGAAAGAGG AAATTCAATA
CCAAATAAAA TTTCAGTACA AAAAGCCGTA GAATTATTGT CAAGTGACAT TCCATTTTTG
AAAATTTCTA ATGATAAAAG AAGACAGGTG TTTGTTGAGA GTAAATATGA TGTAACATAT
TATGAGCTTT TAACTAATAT TCTTTTAACA ATTGACAAGA TAGAATCTGA GCCAATTTAT
TTGCCAGCAA GAACTTCAAA TGGATCTAAT TGTACTGATG TAATTGAAGT AGTAAATAAC
TTGTATGATA ATGGTAATGA CCAAATTTAT GGAATTATTG ATTGGGATAC AAGGAATGAA
AATAAAGGAA GGATAATTGT TTTAGGAGAA AACGAAAGGT ATTCAATTGA AAATTATCTT
TTAGATCCAT TAATGATGGG ATTGCTTTTT ATTAGAGAAG CAAAAGTTCC AATCTCCGAA
TTCGGATTCG AAACAATATC GAAATATTCA GAAATTGGAA ACTTACAACT TGCAGAAGCT
CAGGTGATAA TTGATAAAAT ATTGGTTGAT TTAGGCTTGT TTTCTGCTAA CGTAATTGAA
TATAATTTAT ACAATGGGTG GAAATTAAAT ATTTCTTCCG AATTTAATTT ATTTCAAGGT
CATGATCTTG AAAATTTATA TAAAAGAAAA TATCCTTTTT TAAATGTTTA TCAAAGAGAA
GATTCTCTAA AAAAAGATGT TATTCAAAAG ATTGTAAATG ATTTTCCAGA ATTTGTTCCC
ATTAGAATTT TCGAAACAAT AAAAAAAATT AAATAA
 
Protein sequence
MIKIVIKNKY KSIDVCEFEL PNFSVLTGLN GSGKTHLLEA IANNIISDVY VNGNKISYVR 
YIPFNGLNSD IKEECDPDVI TRWIKSIVDP FRKSLESLKE RGVELTESNL INSSGDMSFR
FAIKKVLEKI GKKIEDITDD DFSNYFDASM IAQNDFFTAQ FALIFKNYHR LFIENELNIY
YKSKNIPTES DGLSNNDFIN RNGIAPWDFV NNILAEIDVP YIVNSPSGTR AESNFKLRLI
NQNNGIEISS QDLSTGEKVL MSLALAIYNS SGIDNKPELL LIDEPDAALH PSMSRKMIDI
LNNHIVKVSK IPSLITSHSP TTIISSDGIS IYQMERGNSI PNKISVQKAV ELLSSDIPFL
KISNDKRRQV FVESKYDVTY YELLTNILLT IDKIESEPIY LPARTSNGSN CTDVIEVVNN
LYDNGNDQIY GIIDWDTRNE NKGRIIVLGE NERYSIENYL LDPLMMGLLF IREAKVPISE
FGFETISKYS EIGNLQLAEA QVIIDKILVD LGLFSANVIE YNLYNGWKLN ISSEFNLFQG
HDLENLYKRK YPFLNVYQRE DSLKKDVIQK IVNDFPEFVP IRIFETIKKI K