Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4877 |
Symbol | |
ID | 5094315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5898160 |
End bp | 5899935 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 644744300 |
Product | AAA ATPase |
Protein accession | YP_001197195 |
Protein GI | 146302604 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0546065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATAAAAA TTGTTATAAA AAATAAATAC AAATCTATAG ACGTTTGTGA GTTTGAACTT CCTAATTTTT CAGTTTTAAC AGGTTTAAAT GGGAGTGGTA AGACACATTT GTTAGAAGCA ATTGCAAATA ATATAATTAG TGATGTATAT GTAAATGGAA ATAAAATTTC TTATGTAAGA TACATTCCTT TTAATGGTTT GAATTCAGAT ATTAAAGAAG AATGTGATCC AGATGTAATC ACAAGATGGA TAAAAAGTAT AGTGGATCCA TTTAGAAAAT CACTTGAGTC ATTAAAAGAA AGAGGCGTAG AATTAACCGA GAGTAATTTG ATAAATTCAA GTGGTGATAT GAGTTTTAGA TTTGCCATAA AAAAAGTTTT AGAAAAAATA GGGAAAAAAA TAGAAGATAT TACAGATGAT GATTTTTCAA ATTATTTTGA TGCATCTATG ATTGCTCAGA ATGATTTTTT TACAGCTCAA TTTGCTCTAA TTTTTAAAAA TTATCATAGA TTGTTTATTG AAAACGAATT AAACATATAT TATAAATCTA AAAATATTCC TACAGAATCT GATGGTTTAT CTAATAATGA TTTCATTAAT AGAAATGGTA TTGCACCATG GGATTTTGTA AATAATATAC TTGCCGAGAT AGATGTACCA TATATTGTAA ATTCACCCAG TGGAACAAGA GCAGAATCTA ATTTTAAATT GAGATTAATT AATCAAAATA ATGGAATAGA AATTTCATCA CAAGATTTGT CAACTGGTGA GAAAGTTTTA ATGTCTTTAG CTTTAGCAAT TTATAATTCA AGTGGAATAG ATAATAAACC TGAGCTTTTA TTGATAGATG AACCTGACGC TGCATTGCAT CCCTCCATGT CTCGAAAAAT GATTGATATA CTTAATAATC ATATTGTAAA AGTAAGTAAG ATTCCTAGTT TGATAACTTC TCATTCACCA ACTACAATAA TTTCGTCAGA TGGGATTTCA ATTTATCAAA TGGAAAGAGG AAATTCAATA CCAAATAAAA TTTCAGTACA AAAAGCCGTA GAATTATTGT CAAGTGACAT TCCATTTTTG AAAATTTCTA ATGATAAAAG AAGACAGGTG TTTGTTGAGA GTAAATATGA TGTAACATAT TATGAGCTTT TAACTAATAT TCTTTTAACA ATTGACAAGA TAGAATCTGA GCCAATTTAT TTGCCAGCAA GAACTTCAAA TGGATCTAAT TGTACTGATG TAATTGAAGT AGTAAATAAC TTGTATGATA ATGGTAATGA CCAAATTTAT GGAATTATTG ATTGGGATAC AAGGAATGAA AATAAAGGAA GGATAATTGT TTTAGGAGAA AACGAAAGGT ATTCAATTGA AAATTATCTT TTAGATCCAT TAATGATGGG ATTGCTTTTT ATTAGAGAAG CAAAAGTTCC AATCTCCGAA TTCGGATTCG AAACAATATC GAAATATTCA GAAATTGGAA ACTTACAACT TGCAGAAGCT CAGGTGATAA TTGATAAAAT ATTGGTTGAT TTAGGCTTGT TTTCTGCTAA CGTAATTGAA TATAATTTAT ACAATGGGTG GAAATTAAAT ATTTCTTCCG AATTTAATTT ATTTCAAGGT CATGATCTTG AAAATTTATA TAAAAGAAAA TATCCTTTTT TAAATGTTTA TCAAAGAGAA GATTCTCTAA AAAAAGATGT TATTCAAAAG ATTGTAAATG ATTTTCCAGA ATTTGTTCCC ATTAGAATTT TCGAAACAAT AAAAAAAATT AAATAA
|
Protein sequence | MIKIVIKNKY KSIDVCEFEL PNFSVLTGLN GSGKTHLLEA IANNIISDVY VNGNKISYVR YIPFNGLNSD IKEECDPDVI TRWIKSIVDP FRKSLESLKE RGVELTESNL INSSGDMSFR FAIKKVLEKI GKKIEDITDD DFSNYFDASM IAQNDFFTAQ FALIFKNYHR LFIENELNIY YKSKNIPTES DGLSNNDFIN RNGIAPWDFV NNILAEIDVP YIVNSPSGTR AESNFKLRLI NQNNGIEISS QDLSTGEKVL MSLALAIYNS SGIDNKPELL LIDEPDAALH PSMSRKMIDI LNNHIVKVSK IPSLITSHSP TTIISSDGIS IYQMERGNSI PNKISVQKAV ELLSSDIPFL KISNDKRRQV FVESKYDVTY YELLTNILLT IDKIESEPIY LPARTSNGSN CTDVIEVVNN LYDNGNDQIY GIIDWDTRNE NKGRIIVLGE NERYSIENYL LDPLMMGLLF IREAKVPISE FGFETISKYS EIGNLQLAEA QVIIDKILVD LGLFSANVIE YNLYNGWKLN ISSEFNLFQG HDLENLYKRK YPFLNVYQRE DSLKKDVIQK IVNDFPEFVP IRIFETIKKI K
|
| |