| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4807 |
|---|
| Symbol | |
|---|
| ID | 5089435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5810663 |
|---|
| End bp | 5811967 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644744230 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001197125 |
|---|
| Protein GI | 146302534 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TAACGGCAGG AATCATATTA ATTTCCATGA CCTTTTTAGG AATAAATGCT
TATTCCCAGA AAAAATCAAA GAAATCTTTT GATGTAAAAC GAAATGAAGT TTACATCGAT
TCGATGATGA CAAATGCACT CGAAAAAGGA TTTTTTCCCG GAGCACAGAT TATAGTGGGA
AATAAAGACG CTGTTTTAAT TTCGAAAAAT TATGGTTTTC AGGATTATTC GAAAAAACAG
CCCGTAAAAT CAGACGACGT TTATGATCTG GCTTCGATGT CGAAAGTTTT GGGAGCGACA
CTTGTGACCA TGCGCTTAGT TGGAGAAGAT AAAATAAAAC TTACCGACAA AGTTGGAGAT
TTGGTTGAAG TTTATAAAAA CACGCCAATT GCTGATTTAA CGTTTTTTGA ATTATTAACG
CATACTTCGG GATTAAAAGC GAGTATTACG TTTTACCAAA GTCTGCTTTC AACGCCAGAT
GGTTTGCCTT TGTTAAGCAA AGAAAAATCA GATGTTTATC CTGATTTGTT TGATACGATG
TATGTGAACA AGAATATTGT GTATGATGCC AATTATCTTT CGTTTACTCC CAAAGAAAAT
TGGGTTCAGA TTTATAAAAA TATGTGGTTA AATCCGGAGT TTTATAAAAC GGTTTATGAG
CAAATTTCAA CTGCAAATAC CAATACAAGA GGGAAATATG TTTACAGCGA CCTGAATTTG
CTTTTGGTAA AACAAATGAT TGAAGCCAAA ACAGGTTTGA AATTAGATGA ATTAACGAAA
GAAATTTATA CGGAATTAGG AATCTCAAAA ATTGGATATA ATCCGTTAAA ATGGACTTCT
TTAGAAAATG TAACGCCGAC AGAATTGGAT AATTTCTTTA GAAAAGATAC AATAAGAGGT
TACGTTCATG ATGAAGCTGC GGCGATTTTT GGCGGTGTTT CTGGAAATGC CGGATTGTTT
GCTAATGCAC AATCAATCTC AGTTATCTGT CAGATGCTGT TGAATGACGG AAAATATCAA
GGAAAAGAAA TTTTAAAAGC AACAGTTGTA AAAGAATTTA CAAGTTCGCC TCTCACCAAA
GAAGGGATTT ACCGCGGACT TGGTTTTGAT AAACGAAAAC CTGATGAGTT TTTTAAAGCT
AATGATTTTG GGCACACAGG TTTTACAGGA ACTTTTTTCT TTATGAATCC AGATACGAAC
AGATTTCTAA TTATTCTGAC CAATCGCGTA AACCCAACGA GAACAAACAG ATTGATGTAT
AAAGATGATT TTAGTGCTAA AATTTGGAGG CAGATTAATA ATTAA
|
|---|
| Protein sequence | MKKITAGIIL ISMTFLGINA YSQKKSKKSF DVKRNEVYID SMMTNALEKG FFPGAQIIVG
NKDAVLISKN YGFQDYSKKQ PVKSDDVYDL ASMSKVLGAT LVTMRLVGED KIKLTDKVGD
LVEVYKNTPI ADLTFFELLT HTSGLKASIT FYQSLLSTPD GLPLLSKEKS DVYPDLFDTM
YVNKNIVYDA NYLSFTPKEN WVQIYKNMWL NPEFYKTVYE QISTANTNTR GKYVYSDLNL
LLVKQMIEAK TGLKLDELTK EIYTELGISK IGYNPLKWTS LENVTPTELD NFFRKDTIRG
YVHDEAAAIF GGVSGNAGLF ANAQSISVIC QMLLNDGKYQ GKEILKATVV KEFTSSPLTK
EGIYRGLGFD KRKPDEFFKA NDFGHTGFTG TFFFMNPDTN RFLIILTNRV NPTRTNRLMY
KDDFSAKIWR QINN
|
|---|
| |