Gene Fjoh_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4790 
Symbol 
ID5089418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5789609 
End bp5790583 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content31% 
IMG OID644744213 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001197108 
Protein GI146302517 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0252158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA ATAATAGGAA TATGAATGAT GATATACTAG TGAAATATAT AGTTGGCGAA 
ACTGATGCAG ACGAAAATGC AATGGTAAAA AAATGGCTGG ATGCCAGTGA TGACAATTTA
AAATACTACA ACGATTTTAA GAAAATCTGG GAAGATAGTC TTTTAATTGC AACAAAAAAT
ACAACTGTAA ATGAAAATGA AGCATGGGAG CGATTTCAAA ATCGTATCCA TAAAAACGAC
ACATCGGTTA TTCTAAACAA GTCATACCCT TATTGGCAGA TAGCTGCTTC GATTATCTTA
ATTATTGGCT TAGGATGGTT TGGTTATTCT TATTTTGAAA ATAAATCAGA TGATACAATA
ATTCAGATAT ATGCATCAAA CAGGGCTAAA AATGATACTT TACCAGATGG TACAATTGTC
ACACTGAACA AAAACTCGTT ATTGTCTTAT AAAAAATTTA CAGGCAATAC CAGACCTGTT
ACTCTAAAAG GTGAAGCTTT TTTTAAGGTT TCTCCCAATA AAACAAAACC TTTTATTATT
CATATTAATG ATGTCACAGT AAAAGTAATA GGAACATCTT TTAATGTGAA AAGCAAAAAC
GGAAAAACCA CCGTAAATGT TGAAACTGGA ATTGTAAAAG TGAGCAGAAA TAAAGATGAG
GTAGAATTAA TGCATGGAGA AAAAGTAGTC ATTGCCAATC AGCAGGCAGG ATTATTTAAA
AGTGTCAGCA AAGGGCGTTT ATACAATTTT TACCGCAATA GAGAATTAGT CTGCGATGAA
ACACCGCTGC AGGAATTAGC AGATGCTCTT AACGAAATAT ACAATGTTAA CATTGTTATT
AAATCAACGT CTTTGCAGGA AAAAACATTA ACGACAACAT TTAAAGATCA ATCATTAGAT
CAGATTTTAG AAGTAATTCA GGAAACATTT ACCATTAAAA TCGAACGTAC AAATAATCAA
ATACTATTAG AGTAA
 
Protein sequence
MSQNNRNMND DILVKYIVGE TDADENAMVK KWLDASDDNL KYYNDFKKIW EDSLLIATKN 
TTVNENEAWE RFQNRIHKND TSVILNKSYP YWQIAASIIL IIGLGWFGYS YFENKSDDTI
IQIYASNRAK NDTLPDGTIV TLNKNSLLSY KKFTGNTRPV TLKGEAFFKV SPNKTKPFII
HINDVTVKVI GTSFNVKSKN GKTTVNVETG IVKVSRNKDE VELMHGEKVV IANQQAGLFK
SVSKGRLYNF YRNRELVCDE TPLQELADAL NEIYNVNIVI KSTSLQEKTL TTTFKDQSLD
QILEVIQETF TIKIERTNNQ ILLE