Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4668 |
Symbol | |
ID | 5094122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5644642 |
End bp | 5646396 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644744089 |
Product | ABC transporter, transmembrane region |
Protein accession | YP_001196986 |
Protein GI | 146302395 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA AAGCATTTGA TACCGGTTTA TTTAAACGGA TTTTAAAATA TACGAAACCT TATAAATGGC GTTACTACGG CGTTATTATT TTTGCGGTTT CGCTCTCTAT TTTTGCAGCT CTGCGACCTT ATTTATTAAA ACAAACGGTC GACGGCTATA TCAAAACGCA CGACAAGACT GGTTTACTGT TATACATTAT TTTAATGGGA TCGGTTTTGC TTATGGAGGT TTTCTCTCAG TTCTATTTTG TGTATTGGGC TAACTGGCTT GGACAGGATA TTGTAAAAGA TATTCGCAAC AAACTTTTCA AACACATTTT AAGTTTTAGA ATGAAATATT TTGATTTGGT TCCGGTTGGG CAGCTGGTTA CCAGATCTGT TTCTGATATT GAATCTATAG CCCGTATTTT CAGTCAGGGA TTGTTTATGA TTATAAGTGA TTTGATGAAA ATGCTGGTGG TTTTGATTTT TATGTTTTAT ATGAACTGGA AACTTACCTG GATTGTGGTT GTTGCAATGC CTATTCTGGT TTATATTACC CGAATTTTCC AACGTAAAAT GCAGGTGGCT TTTGAGGAAG TACGTACACA GATTGCCAAC ATGAATTCGT TTGTTCAGGA ACGTGTAACG GGAATGAAAA TCGTACAGCT TTTTAACCGC GAAAAAATCG AAGCCGAAAA TTTCAGAGTC ATTAACGACA AACACAGAGT TGCGTGGATT AAAACCATTC TATACAACTC GATCTTCTTC CCTATTGCCG ATATTATTTC GTCGATTACC TTAGGTTTAG TTGTAGTTTT TGGAGGATTC AAAATTTTGA ACGGTGATAA TTTTACAACA TTCGGAGATT TGTTTTCTTA TACGATGTTT ATCGGTATGC TTTTTAATCC GTTAAGACAG ATTGCTGATA AATTTAACGA GATGCAGTTA GGAATGATTG CAGCCAATCG TGTTTTTGAT ATCATCCATA CTCAGGATCA TATTCAGGAT ACAGGAACAA TTGAAGCTCC GGTTTTTAAC GGAAGTATCG ATTTTAAACA AGTCCGTTTT AGTTATATTC CCGAAGAAGA AGTTATAAAA GGCATCGATT TATCTGTAAA TGCCGGACAA ACTGTTGCAA TTGTAGGTTC GACCGGAGCA GGAAAATCAA CTATTATTAA TCTGCTGAAT CGTTTTTATG AAATTAACAG CGGTACGATT TGTATTGATG GAGAAAATAT TGAGAATTAC ACTTTGGCTT CACTTCGAAA ACAAATCGCT GTGGTTTTAC AAGATGTATT TTTGTTTGCC GATACGATTT ACAATAATAT TACACTTCAT AACCCTGAAA TTACACGCGA AAAGGTTTTA GATGCTGCAA AGAAAATTGG TGTTCACGAC TTTATTATGA GTCTTCCAGA TAATTATGAT TTTGATGTTA AGGAACGAGG CGTTATGCTT TCGTCTGGTC AAAGACAATT AATTGCTTTT TTACGTTCGT ATGTGAGCAA CCCAAGTATT TTGATTCTAG ATGAAGCAAC TTCGTCTATT GATACCTATT CTGAAGAATT GATTCAGCGT GCAACGGAAA CGATTACAAA AGGAAGAACT TCGATTATTA TTGCACACCG TTTAGCAACA ATTGTAAATG CTGATAAAAT TGTGGTAATG GACAAAGGTT TGATTGTGGA ACAAGGAACT CATCAGGAAT TATTAATGAA AACTGATGGA TATTATAAAA ACTTATACGA TTCTCAATTC TCGGTTGCGA ATTAA
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Protein sequence | MKAKAFDTGL FKRILKYTKP YKWRYYGVII FAVSLSIFAA LRPYLLKQTV DGYIKTHDKT GLLLYIILMG SVLLMEVFSQ FYFVYWANWL GQDIVKDIRN KLFKHILSFR MKYFDLVPVG QLVTRSVSDI ESIARIFSQG LFMIISDLMK MLVVLIFMFY MNWKLTWIVV VAMPILVYIT RIFQRKMQVA FEEVRTQIAN MNSFVQERVT GMKIVQLFNR EKIEAENFRV INDKHRVAWI KTILYNSIFF PIADIISSIT LGLVVVFGGF KILNGDNFTT FGDLFSYTMF IGMLFNPLRQ IADKFNEMQL GMIAANRVFD IIHTQDHIQD TGTIEAPVFN GSIDFKQVRF SYIPEEEVIK GIDLSVNAGQ TVAIVGSTGA GKSTIINLLN RFYEINSGTI CIDGENIENY TLASLRKQIA VVLQDVFLFA DTIYNNITLH NPEITREKVL DAAKKIGVHD FIMSLPDNYD FDVKERGVML SSGQRQLIAF LRSYVSNPSI LILDEATSSI DTYSEELIQR ATETITKGRT SIIIAHRLAT IVNADKIVVM DKGLIVEQGT HQELLMKTDG YYKNLYDSQF SVAN
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