Gene Fjoh_4574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4574 
Symbol 
ID5092885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5531924 
End bp5534113 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content31% 
IMG OID644743992 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001196892 
Protein GI146302301 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.543152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCACA TACGGATTTT TTTATTTACA CTGCTATTTC TGAATTGTTT CAGCAATTTT 
GCCGTAGCAC AATCTGAACC GGTTTCAGAA GCCCGGATAA ACAGATTAAT TAAGGAGGCC
TGGGATGATT TTAAAGACTC CAATTTCGAA AGATCTCTCA TTACTTCACG TGTAGCATTA
AATTATGCCA CAGCAGCAAA AAATGATAAT TTAATTGCAA AGGCATACAA AGTTATTGCC
GGAAATTATA ACGAATTATC AGAAATTGAT AAAGCTCTTT TCTTTTACAA TAAAGGTTTA
TACTACGCAA ATAAAACAGA CAACGATTCG TTAAAGTACA GTCTTCACAA CAATATAGGA
AACATTTATT GTTTCGAAAA AAAGCAGTTT GATAAAGGGA TAGATTATTA CCAAAAATCA
ATTGCTTACA GTTTAAAAAC AAACAACAGC GATCAGATTT ATTTTACCAA TGTCAATATT
GCCTGGGCTT ATTTTGATAT TGGAAGATTT GATGCAGGAT ATCCGTACTT AAAATTTGTT
GGCGATCATG TTGAAAAATA CGGAGATGCT TCCACAGAAA TTATTGTGTA TATGCTGAAT
GGAATGTATT CTAGTTACAA AAACGAAAAT ACAGCCGCTA ATTCTTATTT TTTAAAAGCA
ATTGCCGCCG GAGAAAACAG CGATGAAAAA TCGGATTTGT CTTATACACA TTTAGAATAT
TCAAAATTCT TAACCAAAAT AAAGAATTAT AAAGAGGCTT ATAAGCATCT TGTAAAGTTT
AATGAAATTA CAGAGGAACT TTATAATCAG GAAAAATTAA AAAAAGCATC AATTGCCGGA
TTCAATTTAG AGCTGGATGA ATATAAAAGA CAGATTGACA AAATTGAAAA TGAAAAAACA
TCACAGTCTC AAAGTCTTAA AAAATCAAGA ATTATCGTAA TCCTGTTTAT ACTCACATCT
CTAATCTTAC TTTTTTTAAT TGTAACGCTG ATTAAGAATA TAGGATTTAA GAAAAAACAC
AATTTAGAGC TCTTAGAGGC AAAAGAAATT GCAGAAGAAG CCTCATTACT CAAAACCCAA
TTTATTTCGA CTATAAGCCA CGAATTGCGT ACACCACTGT ATGGTGTGGT AGGAATAACA
AATATGCTTC TTGAAGAACA CAAAGAATTA TCGCAGAGCC AGCATTTAAG TGCTTTAAAA
TTTTCGGCAC GATATTTACT TTCCTTAGTT AACGATATTC TTCAAATTAA TAAAATTGAA
GAAAACAAAG TAGTTTTAGA AAGCTTGACA TTTAATATTT CGGATGAAAT AACAATGATC
AAAAATTCAC TTTCTTTTCT ATCCCAAAAA AATAATAACA AAATTAATGT TGAAATAGAC
GATTATATTC CGGAGTATTT AATTGGTGAT AAACTTCGAC TGGGTCAGAT TTTAATGAAT
TTAGTGAGCA ATGCGCTAAA GTTTACAAAA AACGGGGAAG TTGATATTAT CGTTAAACTA
CATAAGATAG AAGGGAAATT ATACTATCTG GATTTTTTGA TAAGAGATAA CGGAGTTGGA
ATTGCGGCTG TAGATCAAAA TAAAATATTC GAAAAATTCG TTCAGGTAGG ACGAAAAGAT
GAAGATTATC AGGGAACGGG ATTAGGTTTA AGTATAGTAA AACGATTATT GGGGCTTTTT
GGAAGTACAA TTACGCTGGA AAGTGATTTA GGTGCAGGAA CTGCATTTTC ATTTGTAATT
CCGTTTGAAC ATGATCCTCA AAAAACAAAA AAAATAATTG AAGATATAGA GGTGGATTTA
ACATCAAGCG AAATTTATAA AATTCTTATT GTAGAAGATA ATCTAATTAA CCAGCTGGTT
ACTAAAAAGA TTATCGAAAA AAATAATTTT GTCTGCAAAG TCGTTGATGA CGGTTTTGGA
GCGCTTACAA TATTAGAGAA AGAAAGATTT GATCTTATTT TAATGGATAT TAATATGCCG
TTAATGAATG GTTTTGAAGC TACAAAACGC ATTCGGCTGT TAGGGGTAAA AACGCCTATA
GTGGCGTTGA CTGCTTTTGA TAAAGACGAA ATTACAGATG AGGCACTTTC ATCAGGAATG
AATGATATTA TTGTAAAGCC TTTTGAGCCT GTAAAATTGT TTAAGATTAT AAATTACTTA
ATAATAGAAG CGAAAAACGC TGGTTTTTAA
 
Protein sequence
MPHIRIFLFT LLFLNCFSNF AVAQSEPVSE ARINRLIKEA WDDFKDSNFE RSLITSRVAL 
NYATAAKNDN LIAKAYKVIA GNYNELSEID KALFFYNKGL YYANKTDNDS LKYSLHNNIG
NIYCFEKKQF DKGIDYYQKS IAYSLKTNNS DQIYFTNVNI AWAYFDIGRF DAGYPYLKFV
GDHVEKYGDA STEIIVYMLN GMYSSYKNEN TAANSYFLKA IAAGENSDEK SDLSYTHLEY
SKFLTKIKNY KEAYKHLVKF NEITEELYNQ EKLKKASIAG FNLELDEYKR QIDKIENEKT
SQSQSLKKSR IIVILFILTS LILLFLIVTL IKNIGFKKKH NLELLEAKEI AEEASLLKTQ
FISTISHELR TPLYGVVGIT NMLLEEHKEL SQSQHLSALK FSARYLLSLV NDILQINKIE
ENKVVLESLT FNISDEITMI KNSLSFLSQK NNNKINVEID DYIPEYLIGD KLRLGQILMN
LVSNALKFTK NGEVDIIVKL HKIEGKLYYL DFLIRDNGVG IAAVDQNKIF EKFVQVGRKD
EDYQGTGLGL SIVKRLLGLF GSTITLESDL GAGTAFSFVI PFEHDPQKTK KIIEDIEVDL
TSSEIYKILI VEDNLINQLV TKKIIEKNNF VCKVVDDGFG ALTILEKERF DLILMDINMP
LMNGFEATKR IRLLGVKTPI VALTAFDKDE ITDEALSSGM NDIIVKPFEP VKLFKIINYL
IIEAKNAGF