Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4345 |
Symbol | |
ID | 5092515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5248791 |
End bp | 5250098 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644743769 |
Product | phage integrase family protein |
Protein accession | YP_001196671 |
Protein GI | 146302080 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGAAA GCAGTTTTGG TTTGGGATTC TTTTTAAAAA GACCCAAAAT AGAAAGTAAA GAATGGATCG TGTATTTCAG AATAACTGTT GACGGTATCC GTAAGGAAAG CTCAACTAAG AGAAGATGGG ATAATACACG ATGGGATCAA AGGTTCGAAA GAGCGGTCGG CTCAAAGGAA GATGCAAAGT CGCTGAACTT CTTTTTAGAT TCGCTGACTT TAAAAATCAA TGAAATCAAA ACCGAAATGA TGTACAGCGG CAAAACCATA ACCGCTGAGA AAATTATGGA CGGGGTTCTG GGAAAGACAG CGCCAAAGAT TAAGGTGCTC GAAGAATTTC AAAAGCATAA TGATGAAATG GAGGCGCTTC TTGGAAAAGG CTATGCAAAA GGCACCCTTG ACCGGTTTAC CATTACTAAA AACCATTTGA CTGCGTTTAT AAAATTCAAG CTTAAAAAGC ACGATCTTGA ATTTGCGGAT TTGAATCTTG AGTTTGTAAA GGACTTCGAA TTTTACCTTA GAACTGTACG CGACTGCAGC AACAACACAA CCCTAAAGTA TATTGCAAAT TTCAAAAAGA TTGTAATCCG CGCCATTGAT AAGGAGTTAA TCACCAAGGA CCCATTTAAG AACTTTAAGG GACGTAAAAC AAAACTGGTA AAAAAACCAC TCACCGCACA GGAATTGTAC GAACTTGAAA GTCATTATTT CACAACTGAC AGGCTCAATG TCGTAAGGGA TGTATTTGTC TTCCAATGCT ACACTGGTCT GGCTTACATA GACGCTTATC AATTAAAGAA AACTGATATC AAAGAAGGCA TTGATGGAAA TCTATGGATT ATGTCCGAAA GGCAGAAAAC AAACTCATCA TTTAATGTCC CTCTTCTTCC CCAAGCACTG AAAATAGTTG AAAAATATAA AGAGCACCCG CTGTGTATCC AGCGTGGAAC CGTGCTTCCT GTTTCATCCA ACCAGAAAAT GAATGAGTAT CTAAAAGAGG TGGCAGTCTT ATGCGGCTTT CCTTTTACAT TAAACACGCA TATGGCACGC CGTACTTTTG GAAGCACTGT GACATTAAAT AACAACGTCC CTATTAATGT AGTTAAAGAA CTGCTGGGTC ATGCATCGGT AAAACAGACT GAGGCATATG CTATAACTGA GCAGGCCACA ATCGGACGTG AAATGTCTAT TCTCAATAAA AAACTCAATA AAACTGGGTC CAAAATGTCT AAGCCTGATT TGGCGGTTCT CAGCAGGCTC GAAAAGGAAA TTCAGGCAAT CAAAAAGAAA TACAACATTT CTTCGTGA
|
Protein sequence | MLESSFGLGF FLKRPKIESK EWIVYFRITV DGIRKESSTK RRWDNTRWDQ RFERAVGSKE DAKSLNFFLD SLTLKINEIK TEMMYSGKTI TAEKIMDGVL GKTAPKIKVL EEFQKHNDEM EALLGKGYAK GTLDRFTITK NHLTAFIKFK LKKHDLEFAD LNLEFVKDFE FYLRTVRDCS NNTTLKYIAN FKKIVIRAID KELITKDPFK NFKGRKTKLV KKPLTAQELY ELESHYFTTD RLNVVRDVFV FQCYTGLAYI DAYQLKKTDI KEGIDGNLWI MSERQKTNSS FNVPLLPQAL KIVEKYKEHP LCIQRGTVLP VSSNQKMNEY LKEVAVLCGF PFTLNTHMAR RTFGSTVTLN NNVPINVVKE LLGHASVKQT EAYAITEQAT IGREMSILNK KLNKTGSKMS KPDLAVLSRL EKEIQAIKKK YNISS
|
| |