| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4284 |
|---|
| Symbol | |
|---|
| ID | 5090620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 5174116 |
|---|
| End bp | 5175558 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644743708 |
|---|
| Product | Outer membrane protein-like protein |
|---|
| Protein accession | YP_001196611 |
|---|
| Protein GI | 146302020 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTA TCAGCACAAG ACAAATAAAT TTGTTCTATA ATTTCACACT TGAGTTTATG
TACTTCAAAA AAATTACCAT TTTATTTTTC TTGATTTTTG CCTCAGCCAG TTATTGTCAA
ACCCTGTCTT TAAAAGAAGC AATAAAAACC GGGCTTGAGA ATTACGGTTC TATCAAAGCA
AAAAACAATT ACACCAATGC ATCAAAGGAG ACTTTAAAAC AGTCTCGCCG TGATTACCTG
CCGAATCTTA ACTTATCGGC ACAGCAGGAT TACGGAACTG TAAACGGACA AAACGGGCCA
TTGTATGGTT TTGGAGGTCT CGGAGTTGCT TCTTCCGGGT TACCACTTCC GGAACAAAAC
TGGAATTCGG CTTTTGGCGC ACTTTATTTA GTCAACATGA ACTGGGATTT TTTCACTTTT
GGAAAAACAC AGGAAAAAAT CAATTTATCT AAAATTGATG TTCTGGCTAA AGAAAAAGAT
TTACAACAGG AAAAATTTCA GCAGGAAATC AAAATTTCGG CTGCCTATTT AAATCTGTTA
GCAAGCCAAA GATTACTGAT TTCACAGCAA AAGAACTTAG ACTGCGCAGA AGTTTTTAAA
AAGACCGCTG CTGCGAGAGT TAAAAACGGA TTATTGGCAG GAGTCGATTC GACTTTGGCA
ACTGCAGAAG TTTCTAAAGC TAAAATTGCT TTAAACCTTG CCAAAAATTT CGTTAAGGAA
CAAAACAACA AATTAGTCGA TTTAATGGGA GTTGCACCTC AGGATTTTGT CGCTGATACT
CTTTTTGTAA CACAGATTCC AAAAGAATTA GTTACCAAAG AAACCGCAGG AGACAGTCTT
CACCCATTAT TACAATTCTA TAAAACGAAA ATCGATTACA GCAACCAGCA GGTTAAATTG
TATAAAAGAT TCTACTATCC TACAATGAGT GCTTTTGGGG TTTTACAAAC CAGAGCTTCG
GGATTTGATT CTTCGTATGC AACCAATCAA AACGCTTTTA CAAGAAATTA CTGGGATGGT
GTAAATCCGG ATCGTACTAA CTACTTAATT GGAGTTGGAA TTACCTGGAA TTTAACTACG
CCTTTTAGAT CCAGCAAACA AGTAAGCGCT CAGAAATTTG TTTCTCAGGC CATGCAGGAA
GAATACAATC AGGCAGACAG AGAATTAAAA TCGCAGTTGA ATTTTGCCGA AGATAAAATC
AAAATTACTT TGGAAAATTA TGCCGAAGCA CCGATTCAGG TTGAAGCAGC TAAAAGAGCT
TACATACAAA AATCGACTTT ATACAAAAAC GGTTTAACTG ATCTAACCGA TTTAACACAA
ACAATGTATG TTTTAAATCG TGCTGAAATC GATCGAGATA TTGTCAATAA TAACGTGTGG
CAGTCGTACT TATTAAAAGT CGCTGCAACA GGAAATTTTG ACTTATTTAT AAATGAATTT
TAA
|
|---|
| Protein sequence | MTFISTRQIN LFYNFTLEFM YFKKITILFF LIFASASYCQ TLSLKEAIKT GLENYGSIKA
KNNYTNASKE TLKQSRRDYL PNLNLSAQQD YGTVNGQNGP LYGFGGLGVA SSGLPLPEQN
WNSAFGALYL VNMNWDFFTF GKTQEKINLS KIDVLAKEKD LQQEKFQQEI KISAAYLNLL
ASQRLLISQQ KNLDCAEVFK KTAAARVKNG LLAGVDSTLA TAEVSKAKIA LNLAKNFVKE
QNNKLVDLMG VAPQDFVADT LFVTQIPKEL VTKETAGDSL HPLLQFYKTK IDYSNQQVKL
YKRFYYPTMS AFGVLQTRAS GFDSSYATNQ NAFTRNYWDG VNPDRTNYLI GVGITWNLTT
PFRSSKQVSA QKFVSQAMQE EYNQADRELK SQLNFAEDKI KITLENYAEA PIQVEAAKRA
YIQKSTLYKN GLTDLTDLTQ TMYVLNRAEI DRDIVNNNVW QSYLLKVAAT GNFDLFINEF
|
|---|
| |