Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4243 |
Symbol | |
ID | 5092285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 5113623 |
End bp | 5115584 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644743662 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_001196570 |
Protein GI | 146301979 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.506182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTATA ATGAATCTGA ACGCCTGGAT ATTCTAAAGC GTTACAGTAA TATGCTGGAA GCTCTTCCGG GATATGCATT TGATGATGCA ACTTCCCTGG TATCCTATAT CTGTGGTGTA CCAATTGCCT ACATTGCTTT TATTGACGAA AACCGCCAGT GGTTCAAATC TGAAATTGGT CTTGGCTTTT CCATAGTGCC GCGTGAAATT ACTTTCAGCC GTTACACTAT CATGGATTCT TCTCTGGTAG AAATTCAAGA CACACTGCTC AACGAACGTT TTAAAGATGA TCCTGATGTA AAAGGAGGTT TAAAAATACG GTTTTATGCC GGAATGCCGC TTATTACGCC AGATGGTCAC GCAGTCGGGG TTTTATGTGC TGCAGATCAC GAGCCGCGCT CACTCAATGA AAATCAAAAA AGGGCGCTTC ATATCGTAGC ACGCCATGTT ATTACAACAC TTGAACTTGG GATAAAAAAC AACGAACTTC TCAGACAAAA AAAAATTGCC GAAAGTGCTG TACTGGCAAA AGAATCTTTT TTGGCTAATA TGAGCCATGA AATCAGGACA CCTCTAAATG CTATTATCGG TTTTACTGAA CTTTTGTCCG GAACACCGCT CGATAAACAA CAGCAGGCTT TTATACAGGA TGTTCAGACA GCCGGGGAAA ATCTTTTACT CATAGTGAAT GATATACTGG ATTTATCTAA AATTGAATCC GGAGGACTTT CTCTGGAAAA ACAGCCCTTT AATTTAAAAA AATCACTCCG CCATGTCTAC GATCTTCTAA AAGTAAAAAC TGCTGACGGT GTTGAATTTA ACTTGTTTTT GGATGCCGAA CTTCCTGATG TTATTACAGG CGATCAGGGA AGACTGAATC AGATAATGGT AAATCTGGCA GGAAATGCTC TTAAATTTAC AAATGAAGGT GAAGTGACCA TTTCCGTGAA AAATAAAGGA GAAACAGAGG ATTCTTATAC CATTCGGTTT TCTGTTAAAG ATACCGGAAT AGGTATTCCG AAGGAGCATC TTGAATCTAT ATTTGAACGA TTTACACAGG GTCAGGAAGA CACTACAAGA AAATTTGGAG GCACTGGTCT GGGATTGAGT ATTGTTAAAG AGCTGGTAAA ACTGCACGAT TCAAAAATAC AAGTTAAAAG CCGTGAAGGC GCAGGATCGG AATTTTTTTT CACAACGACG TATAAAAAAC CAGCCAATGT AAAAGAAAAT CCTAAACTGC TTCCGGTAAA TGATCTGGGC AGGCTTAAAA TATTGCTTCT TGAAGACAAC CGCTTAAATC AGAAACTGGC ACAAAACGTT ATTGAAGGGT TTGGATTTGA GATTGATATT GCAGAAAATG GAGATCAGGG TATAAAACTT CTTTCAGAAA ACCAATATGA TCTGGTATTA ATGGATCTTC AGATGCCTGC AAGAGACGGT TATCAAACTA CGCATTACAT TCGCAGTGAG CTCAAAAATG AAATTCCTAT TATAGCCATG ACAGCCCATT CTCTTGCTGA CGAGCATCAT CGTTGTCTGA ATGCCGGAAT GGACGGTTAT GTGCCAAAAC CCTTTAAACA GCATGAACTT CTTGAAGCCA TTAAGCAAGC TTTGAAAAAG GATCGCCGCC CTTTGATTCC TTCTAAAGCA GATTTATCTG CAATTGAAAA AACTGACCGT ATAAAACCTG GGTGGAAAAA AGAAGTTACC TCCCAGTTTA TCCAGAAGGC TCCTGTAGAA CTAAAAGAAT TACAGCAGGC TGTTTATCGT AAAGATTTCA GATCTGTACT GCAAACCGCA GAACAGCTTC AGGTATGGCT GCATCTTTTC CTGCTGGAGA ACTTAAGCCA GACCCTCACC TCTATCGAAG ATCAGGCCCG CAAAAAAGAA TTCACTGCCG AAACTGCTGA CAATCTTGAT ATCCTGCACT GCAATATTGA GGAAATTATA AAAGAACTGT AA
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Protein sequence | MPYNESERLD ILKRYSNMLE ALPGYAFDDA TSLVSYICGV PIAYIAFIDE NRQWFKSEIG LGFSIVPREI TFSRYTIMDS SLVEIQDTLL NERFKDDPDV KGGLKIRFYA GMPLITPDGH AVGVLCAADH EPRSLNENQK RALHIVARHV ITTLELGIKN NELLRQKKIA ESAVLAKESF LANMSHEIRT PLNAIIGFTE LLSGTPLDKQ QQAFIQDVQT AGENLLLIVN DILDLSKIES GGLSLEKQPF NLKKSLRHVY DLLKVKTADG VEFNLFLDAE LPDVITGDQG RLNQIMVNLA GNALKFTNEG EVTISVKNKG ETEDSYTIRF SVKDTGIGIP KEHLESIFER FTQGQEDTTR KFGGTGLGLS IVKELVKLHD SKIQVKSREG AGSEFFFTTT YKKPANVKEN PKLLPVNDLG RLKILLLEDN RLNQKLAQNV IEGFGFEIDI AENGDQGIKL LSENQYDLVL MDLQMPARDG YQTTHYIRSE LKNEIPIIAM TAHSLADEHH RCLNAGMDGY VPKPFKQHEL LEAIKQALKK DRRPLIPSKA DLSAIEKTDR IKPGWKKEVT SQFIQKAPVE LKELQQAVYR KDFRSVLQTA EQLQVWLHLF LLENLSQTLT SIEDQARKKE FTAETADNLD ILHCNIEEII KEL
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