Gene Fjoh_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4243 
Symbol 
ID5092285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5113623 
End bp5115584 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content40% 
IMG OID644743662 
ProductGAF sensor hybrid histidine kinase 
Protein accessionYP_001196570 
Protein GI146301979 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTATA ATGAATCTGA ACGCCTGGAT ATTCTAAAGC GTTACAGTAA TATGCTGGAA 
GCTCTTCCGG GATATGCATT TGATGATGCA ACTTCCCTGG TATCCTATAT CTGTGGTGTA
CCAATTGCCT ACATTGCTTT TATTGACGAA AACCGCCAGT GGTTCAAATC TGAAATTGGT
CTTGGCTTTT CCATAGTGCC GCGTGAAATT ACTTTCAGCC GTTACACTAT CATGGATTCT
TCTCTGGTAG AAATTCAAGA CACACTGCTC AACGAACGTT TTAAAGATGA TCCTGATGTA
AAAGGAGGTT TAAAAATACG GTTTTATGCC GGAATGCCGC TTATTACGCC AGATGGTCAC
GCAGTCGGGG TTTTATGTGC TGCAGATCAC GAGCCGCGCT CACTCAATGA AAATCAAAAA
AGGGCGCTTC ATATCGTAGC ACGCCATGTT ATTACAACAC TTGAACTTGG GATAAAAAAC
AACGAACTTC TCAGACAAAA AAAAATTGCC GAAAGTGCTG TACTGGCAAA AGAATCTTTT
TTGGCTAATA TGAGCCATGA AATCAGGACA CCTCTAAATG CTATTATCGG TTTTACTGAA
CTTTTGTCCG GAACACCGCT CGATAAACAA CAGCAGGCTT TTATACAGGA TGTTCAGACA
GCCGGGGAAA ATCTTTTACT CATAGTGAAT GATATACTGG ATTTATCTAA AATTGAATCC
GGAGGACTTT CTCTGGAAAA ACAGCCCTTT AATTTAAAAA AATCACTCCG CCATGTCTAC
GATCTTCTAA AAGTAAAAAC TGCTGACGGT GTTGAATTTA ACTTGTTTTT GGATGCCGAA
CTTCCTGATG TTATTACAGG CGATCAGGGA AGACTGAATC AGATAATGGT AAATCTGGCA
GGAAATGCTC TTAAATTTAC AAATGAAGGT GAAGTGACCA TTTCCGTGAA AAATAAAGGA
GAAACAGAGG ATTCTTATAC CATTCGGTTT TCTGTTAAAG ATACCGGAAT AGGTATTCCG
AAGGAGCATC TTGAATCTAT ATTTGAACGA TTTACACAGG GTCAGGAAGA CACTACAAGA
AAATTTGGAG GCACTGGTCT GGGATTGAGT ATTGTTAAAG AGCTGGTAAA ACTGCACGAT
TCAAAAATAC AAGTTAAAAG CCGTGAAGGC GCAGGATCGG AATTTTTTTT CACAACGACG
TATAAAAAAC CAGCCAATGT AAAAGAAAAT CCTAAACTGC TTCCGGTAAA TGATCTGGGC
AGGCTTAAAA TATTGCTTCT TGAAGACAAC CGCTTAAATC AGAAACTGGC ACAAAACGTT
ATTGAAGGGT TTGGATTTGA GATTGATATT GCAGAAAATG GAGATCAGGG TATAAAACTT
CTTTCAGAAA ACCAATATGA TCTGGTATTA ATGGATCTTC AGATGCCTGC AAGAGACGGT
TATCAAACTA CGCATTACAT TCGCAGTGAG CTCAAAAATG AAATTCCTAT TATAGCCATG
ACAGCCCATT CTCTTGCTGA CGAGCATCAT CGTTGTCTGA ATGCCGGAAT GGACGGTTAT
GTGCCAAAAC CCTTTAAACA GCATGAACTT CTTGAAGCCA TTAAGCAAGC TTTGAAAAAG
GATCGCCGCC CTTTGATTCC TTCTAAAGCA GATTTATCTG CAATTGAAAA AACTGACCGT
ATAAAACCTG GGTGGAAAAA AGAAGTTACC TCCCAGTTTA TCCAGAAGGC TCCTGTAGAA
CTAAAAGAAT TACAGCAGGC TGTTTATCGT AAAGATTTCA GATCTGTACT GCAAACCGCA
GAACAGCTTC AGGTATGGCT GCATCTTTTC CTGCTGGAGA ACTTAAGCCA GACCCTCACC
TCTATCGAAG ATCAGGCCCG CAAAAAAGAA TTCACTGCCG AAACTGCTGA CAATCTTGAT
ATCCTGCACT GCAATATTGA GGAAATTATA AAAGAACTGT AA
 
Protein sequence
MPYNESERLD ILKRYSNMLE ALPGYAFDDA TSLVSYICGV PIAYIAFIDE NRQWFKSEIG 
LGFSIVPREI TFSRYTIMDS SLVEIQDTLL NERFKDDPDV KGGLKIRFYA GMPLITPDGH
AVGVLCAADH EPRSLNENQK RALHIVARHV ITTLELGIKN NELLRQKKIA ESAVLAKESF
LANMSHEIRT PLNAIIGFTE LLSGTPLDKQ QQAFIQDVQT AGENLLLIVN DILDLSKIES
GGLSLEKQPF NLKKSLRHVY DLLKVKTADG VEFNLFLDAE LPDVITGDQG RLNQIMVNLA
GNALKFTNEG EVTISVKNKG ETEDSYTIRF SVKDTGIGIP KEHLESIFER FTQGQEDTTR
KFGGTGLGLS IVKELVKLHD SKIQVKSREG AGSEFFFTTT YKKPANVKEN PKLLPVNDLG
RLKILLLEDN RLNQKLAQNV IEGFGFEIDI AENGDQGIKL LSENQYDLVL MDLQMPARDG
YQTTHYIRSE LKNEIPIIAM TAHSLADEHH RCLNAGMDGY VPKPFKQHEL LEAIKQALKK
DRRPLIPSKA DLSAIEKTDR IKPGWKKEVT SQFIQKAPVE LKELQQAVYR KDFRSVLQTA
EQLQVWLHLF LLENLSQTLT SIEDQARKKE FTAETADNLD ILHCNIEEII KEL