Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4219 |
Symbol | |
ID | 5093849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 5072403 |
End bp | 5073590 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743638 |
Product | beta-lactamase |
Protein accession | YP_001196546 |
Protein GI | 146301955 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.310233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACT TTTTCTTACT TATTTTTTTT GCAGGCATTT TTGGTGTTCA CTCACAAAAT GCAGCTTTGA TTAAAAGGCT TGACGGAAGC ACTATTTCCC AGGACAGCTT AACATCGGCC ATAAAATATC TTATGAATAA AGCCGATGTA AAAGGACTTG CCATTACGGT TTTTAATTCT AAAAAACCGG TTTATATGAA TGCCTTCGGC TTTAGCGATG TCGAAAATAA TAAAAAATTA GATCTGCATA CCAATTTATA CGGAGCTTCT TTTAGCAAAG CAGTATTTGC TGTTGTAGTT ATGAAACTGG TTGACGAAGG TGTAATTAGT TTAGACAAAC CTTTGCAAAG CTATCTTCCA AAATCAATTT ACGAGTATGA ACCTAAAGTA TGGCACGAAG ATTTTAAAGA ATTAAAAGAT TATCCCGAAT ACACTAAAAT TACAGCCAGA ATGTGTCTGG ACCACACAAC CGGACTTCCT AACTGGCGCT GGTTTGAATC TGACGAAAAA TTACGCATTA AGTTTGAACC GGGAAGCCGT TACAGTTATT CTGGAGAAGG ATTGACATAT CTTCAGGTAG TTTTAGAAAA AATAACCAGA AAACCTTTAG AAGAACTTGC TCAGGAAAGA GTGTTTAAAC CTTTGGGAAT GACAGCTTCC AGCTACAAAT GGCAGGAAAA ATTTGAGAAA GATTATGCGT ACGGATATGA TGAAGAAGGA AAAAAACAGG AAAAAGACAA AGACAATGCG CCAAGAGGAG CAGGAACACT GGAAACTACT ATTGAAGATT ACAGTAAATT TTTAACTGCT ATCCTGAATA AAAAAATACT AAGTTCAAAA TCATACAAAG AATTGTTTAG TCCGCAGATT CGTATTCATT CTAAAAACCA ATTTGGACCC GGCGCGTTAG AAGACGGTAA TTGGTATGAC AATCTCGAAC TTTCATACGG TTTAGGCTGG GGACTCGTAA AATCACCTTA CGGACCAGGA GCATTTAAAG AAGGGCAGGG TTCTGGGTTT CAGAATTACA GTATCGTATT TCCAGATAAA GGAATTGGAA TGCTTATAAT GTCAAACAGC TACAGCACAG GAAAAATAAT TAAATACCTG TTAGAAACAG GAATTCAGGA CAAATACACA CCATGGGAAT GGGATCAGTA TATTCCTTAT GATAAAGTGA TTAAATAA
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Protein sequence | MKHFFLLIFF AGIFGVHSQN AALIKRLDGS TISQDSLTSA IKYLMNKADV KGLAITVFNS KKPVYMNAFG FSDVENNKKL DLHTNLYGAS FSKAVFAVVV MKLVDEGVIS LDKPLQSYLP KSIYEYEPKV WHEDFKELKD YPEYTKITAR MCLDHTTGLP NWRWFESDEK LRIKFEPGSR YSYSGEGLTY LQVVLEKITR KPLEELAQER VFKPLGMTAS SYKWQEKFEK DYAYGYDEEG KKQEKDKDNA PRGAGTLETT IEDYSKFLTA ILNKKILSSK SYKELFSPQI RIHSKNQFGP GALEDGNWYD NLELSYGLGW GLVKSPYGPG AFKEGQGSGF QNYSIVFPDK GIGMLIMSNS YSTGKIIKYL LETGIQDKYT PWEWDQYIPY DKVIK
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