Gene Fjoh_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4219 
Symbol 
ID5093849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp5072403 
End bp5073590 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content36% 
IMG OID644743638 
Productbeta-lactamase 
Protein accessionYP_001196546 
Protein GI146301955 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.310233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT TTTTCTTACT TATTTTTTTT GCAGGCATTT TTGGTGTTCA CTCACAAAAT 
GCAGCTTTGA TTAAAAGGCT TGACGGAAGC ACTATTTCCC AGGACAGCTT AACATCGGCC
ATAAAATATC TTATGAATAA AGCCGATGTA AAAGGACTTG CCATTACGGT TTTTAATTCT
AAAAAACCGG TTTATATGAA TGCCTTCGGC TTTAGCGATG TCGAAAATAA TAAAAAATTA
GATCTGCATA CCAATTTATA CGGAGCTTCT TTTAGCAAAG CAGTATTTGC TGTTGTAGTT
ATGAAACTGG TTGACGAAGG TGTAATTAGT TTAGACAAAC CTTTGCAAAG CTATCTTCCA
AAATCAATTT ACGAGTATGA ACCTAAAGTA TGGCACGAAG ATTTTAAAGA ATTAAAAGAT
TATCCCGAAT ACACTAAAAT TACAGCCAGA ATGTGTCTGG ACCACACAAC CGGACTTCCT
AACTGGCGCT GGTTTGAATC TGACGAAAAA TTACGCATTA AGTTTGAACC GGGAAGCCGT
TACAGTTATT CTGGAGAAGG ATTGACATAT CTTCAGGTAG TTTTAGAAAA AATAACCAGA
AAACCTTTAG AAGAACTTGC TCAGGAAAGA GTGTTTAAAC CTTTGGGAAT GACAGCTTCC
AGCTACAAAT GGCAGGAAAA ATTTGAGAAA GATTATGCGT ACGGATATGA TGAAGAAGGA
AAAAAACAGG AAAAAGACAA AGACAATGCG CCAAGAGGAG CAGGAACACT GGAAACTACT
ATTGAAGATT ACAGTAAATT TTTAACTGCT ATCCTGAATA AAAAAATACT AAGTTCAAAA
TCATACAAAG AATTGTTTAG TCCGCAGATT CGTATTCATT CTAAAAACCA ATTTGGACCC
GGCGCGTTAG AAGACGGTAA TTGGTATGAC AATCTCGAAC TTTCATACGG TTTAGGCTGG
GGACTCGTAA AATCACCTTA CGGACCAGGA GCATTTAAAG AAGGGCAGGG TTCTGGGTTT
CAGAATTACA GTATCGTATT TCCAGATAAA GGAATTGGAA TGCTTATAAT GTCAAACAGC
TACAGCACAG GAAAAATAAT TAAATACCTG TTAGAAACAG GAATTCAGGA CAAATACACA
CCATGGGAAT GGGATCAGTA TATTCCTTAT GATAAAGTGA TTAAATAA
 
Protein sequence
MKHFFLLIFF AGIFGVHSQN AALIKRLDGS TISQDSLTSA IKYLMNKADV KGLAITVFNS 
KKPVYMNAFG FSDVENNKKL DLHTNLYGAS FSKAVFAVVV MKLVDEGVIS LDKPLQSYLP
KSIYEYEPKV WHEDFKELKD YPEYTKITAR MCLDHTTGLP NWRWFESDEK LRIKFEPGSR
YSYSGEGLTY LQVVLEKITR KPLEELAQER VFKPLGMTAS SYKWQEKFEK DYAYGYDEEG
KKQEKDKDNA PRGAGTLETT IEDYSKFLTA ILNKKILSSK SYKELFSPQI RIHSKNQFGP
GALEDGNWYD NLELSYGLGW GLVKSPYGPG AFKEGQGSGF QNYSIVFPDK GIGMLIMSNS
YSTGKIIKYL LETGIQDKYT PWEWDQYIPY DKVIK