| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4131 |
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| Symbol | |
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| ID | 5094040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4964572 |
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| End bp | 4967745 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644743550 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001196458 |
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| Protein GI | 146301867 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA GATTTATACA AAGACCCGTA CTCTCGACGG TAATATCTGT TATTATCGTT
ATTTTAGGTG TTTTAGGCCT AATAGAGTTA CCGATTTCAC AATATCCGGA TATTGCACCG
CCAACGGTAA ACGTGGCAGC AAGTTATACA GGAGCCAATG CTGATGTGGT ACTGAAAAGT
ATTGTAATTC CGCTTGAAGA GCAGATTAAT GGTGTAGAAA ACATGACTTA CATGACTTCT
ACAGCAACAA ATGATGGAAA TGCTTCGATC AAAGTTTTCT TTAAAGTAGG AACCAATCCT
GATTTAGCAG CGGTAAACGT TCAGAACAGG GTTTCAAGAG CAACAAGTTT ACTGCCTGTA
GAGGTAACTC AGGCCGGGGT TACAGTAACC AAAAGCCAGA GTAGTAACTT ATTGATTTTC
TCTTTATACA GTGATGATAA AGCATACGAT CAGACGTTTC TTCAAAATTA TGCCAAAATC
AATCTTGTGC CGCAAATCCA GCGTGTAGTT GGGGTAGGAG ATGTAACGGT TTTTGGTGCA
AAAGATTACT CTATGAGAAT CTGGCTGAAA CCAGATGTAA TGCAGCAATA TAAGCTGATT
CCAAGTGATA TTTCGGCTGC TTTGGCAGAA CAGAATATTG AAGCAGCACC AGGTAAATTT
GGTGAAAACG GAAATCAGGC GTTTCAATAT GTAATTAAAT ACAAAGGACG TTTAACATCG
GCTAAGGAAT TTGAGGAAAT TGTAATCAAA TCAGTTGGAA ACGGGCAGAT GCTTCGACTT
AAAGATGTTG CTAAGGTAGA ATTAGGATCC TTAAGTTATG CTTCAACGAT TAAAACAAAC
GGTGTAGAAT CGGCAGCGAT GGCTATCAGT CAGACTCCGG GATCGAATGC ACGTGATGTA
ATTATCAATT CTAAAAAACT GATTGAAGAA GCGGCAAAGA GTTTTCCAAA AGGGATGAAA
TACACCATTA TGGTTGACGT TAACGAAAAC CTTGATGCAT CTATTGAAAA AGTAATTCAT
ACTTTGATTG AAGCCTTTAT ACTGGTTTTT ATTGTAGTAT TTATTTTCCT TCAGGATTTT
AGATCAACCT TAATTCCGGC AATTGCGGTT CCGGTTGCGA TTGTAGGAAC GTTCTTCTTC
CTTAATTTAT TTGGATTTAC GATTAACTTA TTGACCCTTT TTGCGATGGT ACTCGCAATT
GGTATTGTGG TCGATGATGC GATTGTGGTC GTCGAGGCGG TGCACGCCAA ACTGGATCAC
GGTTATAAAT CGGCCAAAAA AGCTACAATA CATGCGATGA ACGAAATATC GGGGGCGATT
ATATCAATCA CGCTTGTAAT GGCTGCGGTT TTTATTCCGG TAACTTTCAT TACCGGATCA
ACCGGAGTTT TCTATAAACA GTTTGGTATT ACACTGGCTG TTGCGATTAT TCTTTCGGCA
GTAAACGCCT TGACTTTAAG TCCGGCTTTA TGTGCCTTGC TTTTAAAACC GCACGGCGAC
GATCACGAAC ATAAGACTAC TTATTTACAA AGATTTTATA CGGCTTTTAA CGTTGCGTTT
GATAATGTAA CAGGAAAGTA CAAAAGATCG GTTCAGTTTC TTTCGGTTAA AAAATGGATT
GCTTTAGCAT CTATTGTAAT TGCAGGTGTT GCATTGGTTT ATATGATGAA AACGACACCG
TCTGCATTCG TTCCTTCAGA AGATCAGGGA ACTGTTTTTG CCAATATCAG CTTACCGCCG
TCTGCTTCTA TGGAACGTTC AGATATCATG GCAAAAAAGG TAGACAGTAT TGCGAAAACT
ATTCCGGGAG TTAAAAATAC ACTTCGTATC GTAGGGCAGA ACTTTACCGC CGGAGCGGGT
AGTGCTTACA GTATGGTAAT TGTAAAATTA TATCCGTGGG ACAAACGTGA TTTAAGTGTT
GATGATGTAA TCGGACAGCT TTTTGCAAAA ACAAGCGGTA TTCGTGAGGC TAATATATTC
TTTATTTCGC CGCCAACTAT TCAAGGTTTT GGACAAAGCG GCGGGTTTGA ATTCCAGCTG
CAGGATAAAG GAGGACATAC AACTGCTGAA TTCTATAAAG TAAACAATGA ATTCCTTGCT
AAATTAGCAG AACGTCCGGA AATACAATAT GCAACAACAC CATTTAACCC TGGTTTCCCG
CAATATATGA TGGATGTTAA TTTGGCGAAA GCTAAAGATG CAGGAGTTTC GGTAAATACT
ATTTTATCGA CTATGCAGGG GTATTATGGT GGATTGTATG CTTCGAATTT CAATAAATTC
GGTAAACAAT ACCGTGTAAT GGTTCAGGCA GCTCCAGAAT TTAGAGCTAA TACAGAAGGA
TTAAATAAGA TTTTCGTTCG TAACAGTGCC GGAAACATGG CTCCAATTAC TGAGTTTGTA
AAAATGACAA GGGTTTTTGG TCCTGAATCG ATTTCAAGAT TTAACTTGTT TACGTCTATT
TCGATTACCG GAGCGCCAAA ACCTGGTTAC AGTTCTGGAG ATGCAATTAA AGCAATTCAG
GAAGTAGCTG CAGAAAACCT TCCTGCAGGT TATGGATATG AATTTTCAGG TTTAACACGT
GAGGAATTAG CTTCTGGAGG AGAAACGATT TTCATCTTTA TTTTATGTTT GGTTTTCGTT
TATTTCTTAT TAAGTGCGCA GTACGAAAGT TATATTTTAC CATTTGCGGT ATTATTCTCG
ATTCCGTTTG GATTAGCAGG AGCATATTTA TTCTCGATTA TTTTCAAACT AAACAGTAAT
ATTTACCTTC AGATTTCCTT AATCATGCTT ATCGGGCTTC TTGCCAAGAA CGGTATTTTG
ATTGTCGAAT TTGCTTTAGA CAGAAGGCGT AAAGGTCTGC CAATTGTACA AGCGGCAATT
GAAGGAGCCG TAGCGCGTTT AAGACCAATT TTGATGACTT CGTTTGCCTT TATTCTTGGA
CTTGTGCCTT TAATGTTTGC TACTGGAGCA GGTGCCGTGG GTAACAAATC GATTGGTACT
GGAGCAGTTG GAGGTATGTT AATTGGAACC ATTTTAGGAG TATTTGTTAT TCCGGTTTTA
TTTATCATTT TCCAGACTTT ACAAGAAAAA GTAAGCGGTC CGGCAAAAGA TGGTTATGAT
GATGACGACG ATGATGAGGA TGAAATTCAG TTAATAGAAG CTCACAAAGA GTAA
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| Protein sequence | MFKRFIQRPV LSTVISVIIV ILGVLGLIEL PISQYPDIAP PTVNVAASYT GANADVVLKS
IVIPLEEQIN GVENMTYMTS TATNDGNASI KVFFKVGTNP DLAAVNVQNR VSRATSLLPV
EVTQAGVTVT KSQSSNLLIF SLYSDDKAYD QTFLQNYAKI NLVPQIQRVV GVGDVTVFGA
KDYSMRIWLK PDVMQQYKLI PSDISAALAE QNIEAAPGKF GENGNQAFQY VIKYKGRLTS
AKEFEEIVIK SVGNGQMLRL KDVAKVELGS LSYASTIKTN GVESAAMAIS QTPGSNARDV
IINSKKLIEE AAKSFPKGMK YTIMVDVNEN LDASIEKVIH TLIEAFILVF IVVFIFLQDF
RSTLIPAIAV PVAIVGTFFF LNLFGFTINL LTLFAMVLAI GIVVDDAIVV VEAVHAKLDH
GYKSAKKATI HAMNEISGAI ISITLVMAAV FIPVTFITGS TGVFYKQFGI TLAVAIILSA
VNALTLSPAL CALLLKPHGD DHEHKTTYLQ RFYTAFNVAF DNVTGKYKRS VQFLSVKKWI
ALASIVIAGV ALVYMMKTTP SAFVPSEDQG TVFANISLPP SASMERSDIM AKKVDSIAKT
IPGVKNTLRI VGQNFTAGAG SAYSMVIVKL YPWDKRDLSV DDVIGQLFAK TSGIREANIF
FISPPTIQGF GQSGGFEFQL QDKGGHTTAE FYKVNNEFLA KLAERPEIQY ATTPFNPGFP
QYMMDVNLAK AKDAGVSVNT ILSTMQGYYG GLYASNFNKF GKQYRVMVQA APEFRANTEG
LNKIFVRNSA GNMAPITEFV KMTRVFGPES ISRFNLFTSI SITGAPKPGY SSGDAIKAIQ
EVAAENLPAG YGYEFSGLTR EELASGGETI FIFILCLVFV YFLLSAQYES YILPFAVLFS
IPFGLAGAYL FSIIFKLNSN IYLQISLIML IGLLAKNGIL IVEFALDRRR KGLPIVQAAI
EGAVARLRPI LMTSFAFILG LVPLMFATGA GAVGNKSIGT GAVGGMLIGT ILGVFVIPVL
FIIFQTLQEK VSGPAKDGYD DDDDDEDEIQ LIEAHKE
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