Gene Fjoh_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4080 
Symbol 
ID5090806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4877994 
End bp4880744 
Gene Length2751 bp 
Protein Length916 aa 
Translation table11 
GC content36% 
IMG OID644743499 
Productalpha-L-rhamnosidase 
Protein accessionYP_001196407 
Protein GI146301816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTTTTACA TCTTACCTTA ATCATTTCAC TTTTCACAAT TTCGGCGAAA 
GCCCAAACCA AAATAATTGT GAGTGATTTA AAATGCGAAA TGCTAACGAA TCCAGAAGGA
ATTGACGTTT TACAGCCAAG ATTGAGCTGG AAAATTAAAG CAGATATTAA TGATGTAAAA
CAAACTCATT ATCAAATTTT AGCTTCTTCG TCTTTAGAAA AACTAAATGC AGGAAACGCA
GATTTATGGG ATAGCGGAAA GGTACAAAGC GACGAATCTG TAAATGTAAT TTATAACGGA
AAAAAGCTAA AAGATAGACA AGATGTTTAT TGGAAAGTAA TGATTTTTAC CAATAAAGGA
GAAATTCAAT CAAAAGAAAC AGCACATTTT AGCATCGGAA TTTTGACTTA TGCTGATTGG
AAATCAACAC GATGGATTGG TTATGAAAAA ACTTCTCCAG GAGATAGTAT TTCGCAGTAT
TCACGATTAT CAGCGAGATA TTTAAGAAAA GAAATTGACT TGAAAAAGAA AGTCAAAAGT
GCCAAGGTTT ATATCATGGG AATGGGCTTG TACGAGTTAT ACATTAACGG AAATAAAATT
GGAGATCAGG TTTTAGCACC AGTTCCTACG GATTATACTA AGAACGTGAA ATACAATGTT
TTTGATGTGA CTTCGCAATT GCAGGAAGGT AAAAATGCGT TGGGAACGAT TTTAGGAAAC
GGACGTTTTT TTACGATGCG TCAAGATTAT AAACCTTATA AAATCAAAAC TTTTGGGTAT
CCGAAAATGG CTTTGCAGTT GTTTGTGGAA TATACAGACG GAAGTAAAGA CGTAATCAGA
ACAGATGATA CTTGGAAAAT CACAACTGAC GGTCCGATTT TATCGAACAA CGAATACGAT
GGTGAAGAAT ATGATGCCCG TAAAGAAATG AAAGGCTGGA ATACCATTAA TTTCAATGAT
AAAAAATGGC TTTCGGCAGA ATATGTTCAG GAACCGGGCG GATTCTACGA AGGACAGATG
TCGGCGAATA TGAAGATAAA ACGTGAAGTA AAACCTATTT CGATCAAACA AACATCAAAA
GGAACTTATA TCTTAGATAT GGGGCAAAAT ATGGTGGGCT GGTTACAATT GAAAGTGAAA
GGAAATGCTG GAGATAAAAT CACAATGAAA TTTGCCGAAT CCTTACAGCC AGATGGTTCG
TTGTATATTG CCAATCTTCG TGATGCCAAA ACAACTGATA TTTATACGTT AAAAGGTGAA
GGCGAAGAAG TTTGGGAACC TCGTTTTATT TTTCACGGAT TTCGATTTGT GGAGATTTCA
GGTTTCAAAA CAAAACCTAC TTTAGAAAAT TTCGTTGGAA AAGTCGTTTA TGATGACATT
GCCACAACAG GAACTTTTGA TTCGTCAAAC CCAATTATGA ATCAGATTTT TAAGAATGCT
TGGTGGGGAA TCAGCGGGAA TTATAAAGGA ATGCCAATTG ATTGTCCGCA ACGAAATGAG
CGTCAGCCTT GGTTGGGAGA CAGAACAACG GGAGCTTACG GAGAAAGTTT TTTATTTGAT
AATCAGACTT TATATGCAAA ATGGTTAGAT GATATTAAAA ACTCACAAAC TATTGATGGC
GGACTTCCAG ATGTGGCACC AGCTTTCTGG CGTTATTACG GAGATAATGT GACTTGGCCG
GGAACGTATA TTACAGTTGC TGATATGCTG TATCAGCAAT TTGGAGACAA AAAAGTAGTA
GAAAAACAGT ATCCGTCTAT GAAAAAATGG ATGGACTATA TGGAAGAAAA CTATTTAGTT
GATGATATCA TGACCAAAGA CAAATACGGC GATTGGTGTG TTCCGCCTGA ATCTTTGGAA
TTAATCCGTT CGAAAGATCC TTCTCGTTTA ACGGACGGCG AATTGATTTC GAGTGCGTTT
TATTATCAGC TTCTAAATAT CATGAAAAAG TTTGCTGTTA TTGCCAATGC ACAAAATGAC
ATTAAACATT ATGACGAATT AGCTTCGAGA ATCAAAAAAG CATTCAACGC TAAATACTTT
AATCCATCAA AAAATAATTA TGCCAATAAT ACCGTAACAG CCAATTTACT GCCTTTGACT
TTCGGAATGG TTCCAGAAGA ATTACAGCAA AAAGTTTTCG AAAATCTGGT ACACGAAGTG
GAAGTGACAA AAAACGGTCA CGTAAGCACG GGAGTTATTG GAACACAGTT TTTAATGCGA
ACATTAACCA ATTTTGGTCG TGGCGATTTG GCTTTCAAAT TAGCCTCAAA TAAAACATAC
CCAAGCTGGG GTTATATGGT TGAAAACGGC GCCACAACCA TTTGGGAACT TTGGAACGGA
AATACTGCCG ATCCGGCAAT GAATTCGCAA AATCACGTCA TGCTTTTAGG CGATTTACTG
ATTTGGTATT ACGAAAATAT GGCAGGAATC AAAAGCAATC CTGAAACACC GGGTTTCAAA
CAAATTATCA TGAAACCTGA TTTTAATGCC GGATTAACTT ATGTAAATGC TTCATACGAA
TCAATTTACG GAACAATCAA AAGTGACTGG AAAAAAGATA AAAAAGCTTT AGTTTGGAAT
ATTACTATTC CTGCAAATAC TTCTGCGGTT GTTTATTTAC CAACTCATAA TGCTTCATCA
GTTACTGTAA ACAAACAAAA GTTAGCTCAA TTTTCAGGAA CTTATAAAAT AGAAGATAAT
AGCACAGTTT TAACTTTACC TTCTGGTACT TACGTTTTGA ATATGAAATG A
 
Protein sequence
MKKFFLHLTL IISLFTISAK AQTKIIVSDL KCEMLTNPEG IDVLQPRLSW KIKADINDVK 
QTHYQILASS SLEKLNAGNA DLWDSGKVQS DESVNVIYNG KKLKDRQDVY WKVMIFTNKG
EIQSKETAHF SIGILTYADW KSTRWIGYEK TSPGDSISQY SRLSARYLRK EIDLKKKVKS
AKVYIMGMGL YELYINGNKI GDQVLAPVPT DYTKNVKYNV FDVTSQLQEG KNALGTILGN
GRFFTMRQDY KPYKIKTFGY PKMALQLFVE YTDGSKDVIR TDDTWKITTD GPILSNNEYD
GEEYDARKEM KGWNTINFND KKWLSAEYVQ EPGGFYEGQM SANMKIKREV KPISIKQTSK
GTYILDMGQN MVGWLQLKVK GNAGDKITMK FAESLQPDGS LYIANLRDAK TTDIYTLKGE
GEEVWEPRFI FHGFRFVEIS GFKTKPTLEN FVGKVVYDDI ATTGTFDSSN PIMNQIFKNA
WWGISGNYKG MPIDCPQRNE RQPWLGDRTT GAYGESFLFD NQTLYAKWLD DIKNSQTIDG
GLPDVAPAFW RYYGDNVTWP GTYITVADML YQQFGDKKVV EKQYPSMKKW MDYMEENYLV
DDIMTKDKYG DWCVPPESLE LIRSKDPSRL TDGELISSAF YYQLLNIMKK FAVIANAQND
IKHYDELASR IKKAFNAKYF NPSKNNYANN TVTANLLPLT FGMVPEELQQ KVFENLVHEV
EVTKNGHVST GVIGTQFLMR TLTNFGRGDL AFKLASNKTY PSWGYMVENG ATTIWELWNG
NTADPAMNSQ NHVMLLGDLL IWYYENMAGI KSNPETPGFK QIIMKPDFNA GLTYVNASYE
SIYGTIKSDW KKDKKALVWN ITIPANTSAV VYLPTHNASS VTVNKQKLAQ FSGTYKIEDN
STVLTLPSGT YVLNMK