Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3966 |
Symbol | |
ID | 5089919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4736665 |
End bp | 4738182 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743387 |
Product | glycosyl hydrolase family 32 protein |
Protein accession | YP_001196295 |
Protein GI | 146301704 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.953512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTCAG GATCAGGATT TAGCAACTGG GAAATAGGAG ACGTTGATAT ATTTATAGAC GAAAATGGTG TACATCATTT ATTTCACCTG ATTATTCCCA ATCACGATTA TATTGCCCAC GCAGTATCAA AAGACGGACT TTCATGGAAA AGAGTAAAAA ATGCTCTTTG GGTTGGAGAA CCCGGTGAAT GGGATGATGA TATGTTGTGG ACAATGCATG TGAGTAAAAT ATCAGGTGGA AAAGGATATG AAATGTATTA TACCGGACTT AAACGTCAGG ATAAGGGAAT CGAACAGAAA ATAGGAAGGG CGTTTTCAAA AGATTTAATT ATCTGGAAAA AAGAAAACTT ACATGGACTT CCTTTTAAAA GTGAAGCACC GCATTACGAA AGCCCGTCAA ATAATCCTCG TGAATGGATT AGTTTTCGAG ATCCTTTTAA ATACCATTAT CAGGGAGAAG ATTATTTATT GATTTGTGCC CGAAGCGCTT CTGGACCAAC TTACAGACGC GGCTGTATTG GAGTTGCGAA GCTGGAAAAA GAAGGTTTTG TACTTCAAAA ACCACTTCAT ATTCCGTATG TATATGATGA TGTTGAATGT CCCTGCGTTG TCGAAATTAA AGGGTCGCAT TATCTTTTGG GTTCCATTAG AGAAGATATT AAAGTGCGAT ATTGGATGGC TCCTGATTTT AAATCAGAGT ATTGTGCTTT TCATAATAAT GTATTGCTGC CACAAGGAAA TTATGCTGCG CGGGTTGTAA AAGACGGTGA CCACTTTTTA ATTTATAATT TTTATTTTGC CGATGGAAAT GTAAATACGC ATCGTGTAAT TCCGCCTCCA AAAGAATTGG ATATAGATAA AAGCGGAAGG CTTCTTTTAA AAACCTATCA TCATTGGAAC AATTTGTACC AAAAGACAAT TTTGCAAAAA GACCTTCCGC AGCCAATGCC TATTTTAGGA AACCCAACTG CCGAATTTGA AATTGAGAAT GAAAATAAAT GGAGATTTGG ATGCCGAAGC GGTTATGAAA TTTACTGCTT CGAAAAACCA TCGGTAGATT TTGTCTGGGA AGGAACACTT GCTGTAGAAG GAATGGGAAA AACCGGATTT GTAATTGAAT GTGATAAAGA AGGAACAGGA TATTATATTT CTATAGATTT TATGAACGGT TTTGTGCAGT TTAGAGCCTG GGGATTTAAT GAAAAAGATG TGAAGAACAA TTTCATTTTT GAAAACATTC AGACCAATCA ATTTGAAATT CACGAAACCA AACAAATTTA TTTCAAGATA ATCCGTTACG GAAATTATTA CGAACTTTCG ATTAACGAAA TCGTAAAGCT GACTTTACTG GATTTTAAAT ACAGCGAAGG AAAAATAGGA ATCTACGTTT GTTCTGCCAT AGTGGCCGTG ACAGATTCAC AAATTCACAC GATTCCAGAA CCCGAAAATG AATATGCAGC AGCTGACCCT GATAAATATT TGAAAGATTA TATGAGAATC ACACAGATTC AGAATTAG
|
Protein sequence | MYSGSGFSNW EIGDVDIFID ENGVHHLFHL IIPNHDYIAH AVSKDGLSWK RVKNALWVGE PGEWDDDMLW TMHVSKISGG KGYEMYYTGL KRQDKGIEQK IGRAFSKDLI IWKKENLHGL PFKSEAPHYE SPSNNPREWI SFRDPFKYHY QGEDYLLICA RSASGPTYRR GCIGVAKLEK EGFVLQKPLH IPYVYDDVEC PCVVEIKGSH YLLGSIREDI KVRYWMAPDF KSEYCAFHNN VLLPQGNYAA RVVKDGDHFL IYNFYFADGN VNTHRVIPPP KELDIDKSGR LLLKTYHHWN NLYQKTILQK DLPQPMPILG NPTAEFEIEN ENKWRFGCRS GYEIYCFEKP SVDFVWEGTL AVEGMGKTGF VIECDKEGTG YYISIDFMNG FVQFRAWGFN EKDVKNNFIF ENIQTNQFEI HETKQIYFKI IRYGNYYELS INEIVKLTLL DFKYSEGKIG IYVCSAIVAV TDSQIHTIPE PENEYAAADP DKYLKDYMRI TQIQN
|
| |