Gene Fjoh_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3964 
Symbol 
ID5089917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp4734621 
End bp4735127 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content35% 
IMG OID644743385 
ProductTetR family transcriptional regulator 
Protein accessionYP_001196293 
Protein GI146301702 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT TAGCAAAAGA ATGTGGTATA TCTGTAGCGA CTCTTTATAT TTATTATACT 
GATAAAGAAG ATTTGATCAA AAAAGTGGGA ACCGAACTGG GCACTTATTT TTTTAAAAGT 
TCTTTAAAAG ATTTTTCTCC TGACATGCCT TTTGCAGAAG GTCTTGCCAA ACAATGGGAA 
AACCGTTCGT CGTTTATGAT GGAAAACACA GATAAAATTG CCTGCTGGGA AATTCTTCAA 
AACTCTAATT ATGGCGAAGA TATAATTAAA GAAAGCCTGG CTGATTTTAA GGTAATCATG 
ATGCAGTTTC TGCAGGGAGC TATCGAAAGA AAAGAGATTG TTCCTGTTTC TAAAGAAGTT 
TTCTGGAGTA TCGCTTACGG GCCTTTATAC AATTTACTTC GTTTTCATGA AAAAGGAAGA 
GGACTTGGTG GTAACACGCC TTTCACGTTA ACAAAAGAAG TCCAAAAAGA AACATTAAGC 
TTAATAATTA AAGCATTAAC ACCTTAA
 
Protein sequence
MNRLAKECGI SVATLYIYYT DKEDLIKKVG TELGTYFFKS SLKDFSPDMP FAEGLAKQWE 
NRSSFMMENT DKIACWEILQ NSNYGEDIIK ESLADFKVIM MQFLQGAIER KEIVPVSKEV 
FWSIAYGPLY NLLRFHEKGR GLGGNTPFTL TKEVQKETLS LIIKALTP