| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3744 |
|---|
| Symbol | |
|---|
| ID | 5089778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4441316 |
|---|
| End bp | 4442824 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644743168 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001196076 |
|---|
| Protein GI | 146301485 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGAA ATCCTGCGCT ATTACAAAAT ATAATTGATG CTATTCCCTT TCCCATCGGG
GTATATGTGG GAGATAATTT AGAAATTGCA CTGGCCAATG ATGCCATGAT CAAAACATGG
GGCAAAGGAA ATGATGTACT TGGAAAAACC TATCTGAGTG TTGTTCCTGA AATTGAAAAC
CAGCAGATTC TCGATGAGGC CCTTGGCGTT TTTAAAACCG GAACAGCTTT TCATGCTGTG
GGCAGAAAAG TAGATCTGGT CATGCAGGGA ATTATGACCG AATATTACTT TAATTATAGT
TTTATTCCGC TTTTTGACGA GCATGGAAAA GTCTATGGCG TGCTTAACAC CGGCGCTGAC
ATCACAGATC TGCACAAAGC AAAAGAAGAA ACCCTGAAAG CAAATGAAAA ATTAACCATA
GCCATAGAAA GCTCCGGGAT AGGAAGTTAT GAAATAGACC TTGAAACCAA AAAAATCAAG
ACTTCAGCAA ATTTCAATAC GATCTGTTCC ATTGGAAGCG AAACAACAAA TGACGATTTA
ATTGCAAAGC TGCACCCAGA GGACCTTCAT GCGCGCGAAA AAGCCCATCA GCAGGCGGAG
GCAACGGGAA AAATATGCTA TGAGGCTCGG ATTTTAAATG ATGACGGCTC CTACCGCTGG
GCTAAAATCA ACGGAAAGAT TATCAAGGAC AAAGACGGGT CTGCAAAGAC CATCATTGGT
ATTGTTCAGG ATATACACGA GCATAAGGAA TTTCAGGAGG AACTAAAAAA GCAGGTCGCA
AGCCGTACAA ATGAGCTCAC GCGTTCCAAT AGTGATCTGA TGCATTTTGC CAGCGTAGTG
AGCCACGATC TTCGAGAGCC GCTGCGAAAA ATTAAATTTT TCAATACACT CTTACGAAAT
GACATAGAAG AAAATGTTAA TGAAAAATCT AAAAAATACC TTCATAAAGT AAGCCAGTCT
GCCCAGAGAA TGGAAAATAT CATAGAGGGA ATTTTGACCT ATTCCACCCT TGACAAAACT
TCACAGGTTA TAGAAACAAT TAATGTTAAT AAGGTTATTG AAGACATAAA AATAGACCTT
GAGCTCATAA TAAGGGAAAA AGGTGCTATT TTAGTTACTT CTGATCTTCC CGAGATTCAG
GGAGCGCCGA TTTTAATTAA CCAGCTTTTC TATAACCTCC TGCAAAATGC CTTAAAATTT
TCCAAAGCGG ACCAGCCTCC AAGGATTATC ATAACAAGCA GCATCATCAA TAGTGACGGC
CAGGATTTTG TACAGATAAA AATAAAGGAT AATGGTATTG GAATTGAGGC TGAATTTGCA
GAAAAGATTT TTACGGCATT TGAAAGACTG CATTCCAAAG ACCAGTACGA GGGAAATGGC
CTTGGGCTTG CCCTGTGCAG AAAGATTGCC GAAAGGCATA ATGGTAAAAT AACTGCAGCC
GGGGAAAAGG ACAACGGCGC TGAATTTACG GTGACCCTTC CTTTACAACA AAAAGCCGAT
ACGCTGTAG
|
|---|
| Protein sequence | MYRNPALLQN IIDAIPFPIG VYVGDNLEIA LANDAMIKTW GKGNDVLGKT YLSVVPEIEN
QQILDEALGV FKTGTAFHAV GRKVDLVMQG IMTEYYFNYS FIPLFDEHGK VYGVLNTGAD
ITDLHKAKEE TLKANEKLTI AIESSGIGSY EIDLETKKIK TSANFNTICS IGSETTNDDL
IAKLHPEDLH AREKAHQQAE ATGKICYEAR ILNDDGSYRW AKINGKIIKD KDGSAKTIIG
IVQDIHEHKE FQEELKKQVA SRTNELTRSN SDLMHFASVV SHDLREPLRK IKFFNTLLRN
DIEENVNEKS KKYLHKVSQS AQRMENIIEG ILTYSTLDKT SQVIETINVN KVIEDIKIDL
ELIIREKGAI LVTSDLPEIQ GAPILINQLF YNLLQNALKF SKADQPPRII ITSSIINSDG
QDFVQIKIKD NGIGIEAEFA EKIFTAFERL HSKDQYEGNG LGLALCRKIA ERHNGKITAA
GEKDNGAEFT VTLPLQQKAD TL
|
|---|
| |