| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3475 |
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| Symbol | |
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| ID | 5089676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4140568 |
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| End bp | 4142574 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644742900 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001195808 |
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| Protein GI | 146301217 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.502596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC AGGAAACCAT TCAAACATTA AGAGAAGAAC TTAATCAGCA CAATTACAAT
TACTATGTGC TGGATAACGC CACAATTTCT GATTACGATT TTGATATCAA ATTAAAAGAA
CTGCAGGATT TAGAAAACAA ACATCCTGAA TTTTTTGACG AAGATTCACC AACACAAAGA
GTCGGCGGAA CAGTAACAAA AAACTTCAAA ACCATAGCGC ACCAATACAG AATGTATTCG
CTTGATAATT CCTATTCTAA AGAAGATCTA ATAGATTGGG AAAACAGAAT TCAGCGTGTA
TTAGGTAACG TTAATTTACA ATATACCTGC GAATTAAAAT ACGACGGAGC CTCAATCAGC
ATTTCATACC AAAACGGAAA ATTAGTTCAG GCACTTACAC GCGGCGATGG TTTTCAAGGA
GATGAGGTTA CCAATAATAT CAAAACCATC AAATCTATTC CGTTAAAATT AAAAGGAGAT
TATCCAGAAA GATTTGATAT ACGAGGAGAA ATAATCCTTC CTTTTGCCGG TTTCGAAAAA
ATGAATCAGG AACTAATCGA AATTGGAGAA ACCCCATATT CAAACCCAAG AAATACAGCT
TCCGGAAGTT TAAAATTACA AGACAGTGCA GAAGTGGCAA AACGTCCTCT TGAATGTCTT
TTATATACTG TTGCAGGAAA TAATCTTCCT TTTAAAACTC AATTTGAAGG ATTAGAATCG
GCCAGAAAAT GGGGATTCAA AGTGCCAAAT GAAGCCAAAC TGGTAAACAG TATGCAGGAA
GTTTTTGATT TTATTGACTA TTGGGATGTT CATCGCCATA AATTACCTTA TGAGACTGAC
GGTGTTGTTA TAAAAGTAAA CAGCATTCAT TCTCAGGAAG AACTTGGATA CACGGCAAAA
TCACCACGCT GGGCCATTGC CTACAAATTC AAATCAGAAC AGGCTTCAAC AAAATTAAAA
TCAATATCGT ATCAGGTTGG GCGTACAGGA GCCATTACTC CAGTTGCCAA TCTAGAACCT
GTGCAGCTGG CAGGAACTAT TGTAAAAAGA GCTTCACTTC ACAATGCAGA TCAAATTGAA
AAATTAGACA TTAGAATAAA TGATACCGTT TTTGTTGAAA AAGGCGGAGA AATTATTCCT
AAAATTATTG CCGTAGATCT GGAAAAACGT CCTGAAAATT CAGAAGTTAC ACAATACATA
ACACATTGTC CTGAATGCGA GACTGAATTG GTTCGAAATG CTGGAGAAGC CAACCATTAC
TGCCCGAATT TTTATGGATG CCCACCGCAG ATTATCGGAA GAATCCAGCA TTATATTTCA
AGAAAAGCAA TGGATATTGA AGGACTTGGA GGAGAAACCG TTGCTTTATT ATTCAAAAAC
GGCTTAGTTC ACAACTATGC AGATTTATAT GAATTAAAAG TAGAAGATAT TCTTCATTTA
GAAAGAATGG CACAAAAATC TGCCGAAAAT TTGGTAAACG GTGTAGAAAA ATCAAAAGAA
ATTCCATTTG AAAGCGTTCT TTTTGCGCTT GGAATTCGTT TTGTTGGAGA AACCGTAGCC
AAAAAGCTAG CCAAACATTA TAAAAACATA GACGCTTTAA GCCAGGCTTC ATTAATGGAT
TTAATTCTGG TTGATGAAAT TGGAGAAAGA ATTGCCAGAA GCGTTATCGA ATTTTTCGAA
AACGAAGAAA ATAAAATCAT AATCGAACGA TTAAAAAAAT ACGGTATTCA GTTTGAAACC
GTAGAAAGAG TCAACCCAAA TGCTACCGAG AAATTTATTG GAAAAACTTT TGTAGTTTCA
GGAGTTTTCA GCCAATTTTC AAGAGATGAA TTAAAGAAAG CCATCGAAGA CAACGGAGGA
AAAGTAGGAA GTTCAATTTC TGCAAAAACC GACTTTGTGG TAGCAGGAGA TAATATGGGA
CCAGCTAAAT TAGAAAAAGC AACAAAATTA AATATTCCTA TACTATCTGA AGACGAATTT
ATAACCAAAC TTAATGAAAG CGAATAA
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| Protein sequence | MNIQETIQTL REELNQHNYN YYVLDNATIS DYDFDIKLKE LQDLENKHPE FFDEDSPTQR
VGGTVTKNFK TIAHQYRMYS LDNSYSKEDL IDWENRIQRV LGNVNLQYTC ELKYDGASIS
ISYQNGKLVQ ALTRGDGFQG DEVTNNIKTI KSIPLKLKGD YPERFDIRGE IILPFAGFEK
MNQELIEIGE TPYSNPRNTA SGSLKLQDSA EVAKRPLECL LYTVAGNNLP FKTQFEGLES
ARKWGFKVPN EAKLVNSMQE VFDFIDYWDV HRHKLPYETD GVVIKVNSIH SQEELGYTAK
SPRWAIAYKF KSEQASTKLK SISYQVGRTG AITPVANLEP VQLAGTIVKR ASLHNADQIE
KLDIRINDTV FVEKGGEIIP KIIAVDLEKR PENSEVTQYI THCPECETEL VRNAGEANHY
CPNFYGCPPQ IIGRIQHYIS RKAMDIEGLG GETVALLFKN GLVHNYADLY ELKVEDILHL
ERMAQKSAEN LVNGVEKSKE IPFESVLFAL GIRFVGETVA KKLAKHYKNI DALSQASLMD
LILVDEIGER IARSVIEFFE NEENKIIIER LKKYGIQFET VERVNPNATE KFIGKTFVVS
GVFSQFSRDE LKKAIEDNGG KVGSSISAKT DFVVAGDNMG PAKLEKATKL NIPILSEDEF
ITKLNESE
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