Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3449 |
Symbol | |
ID | 5089650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4116102 |
End bp | 4116761 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644742874 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001195782 |
Protein GI | 146301191 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTC AATCGAATTT AAATACAATT AAAGCAACTT TACCTGAACA CGTAACTCTA GTTGCCGTTT CAAAAACAAA ACCTGTTTCA GATTTGATGC AGGCTTATGA AGCTGGCCAG CGCATTTTTG GAGAAAACAA AATACAGGAA ATGACTGAGA AATGGGAACA AATGCCAAAA GACATTCAAT GGCATATGAT AGGTCATGTT CAGTCGAATA AGGTCAAATT TATGGCTCCT TATGTAACTT TGATTCATGG TGTTGACAGT TTGAAATTAT TACAGGAAAT CAATAAACAA GCTTTAAAAA ATAACAGAAC AATAGATTGC CTTCTTCAAA TATATATTGC TGAAGAAGAA TCTAAATTTG GTCTAGACGA AAACGAATTA AATGAACTTT TAACTTCTGT GGAGTTTAAA GAGTTAAAAA ATATTCGTAT CTTAGGTTTA ATGGGAATGG CAACATTCAC AGAAGATCAA AACCAGATAA AAAAAGAATT TACCCATTTA AAATCCATTT TTAATTCGAT AAAAAATCTG AAAACTGAAA ACTGCAGCCT GAACACCATA TCGATGGGAA TGTCTGGAGA TTATCAATTG GCAATAGAAT GCGGAAGCAC AATGGTACGC ATTGGAAGCA GCATTTTTGG AGGCAGATAA
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Protein sequence | MSIQSNLNTI KATLPEHVTL VAVSKTKPVS DLMQAYEAGQ RIFGENKIQE MTEKWEQMPK DIQWHMIGHV QSNKVKFMAP YVTLIHGVDS LKLLQEINKQ ALKNNRTIDC LLQIYIAEEE SKFGLDENEL NELLTSVEFK ELKNIRILGL MGMATFTEDQ NQIKKEFTHL KSIFNSIKNL KTENCSLNTI SMGMSGDYQL AIECGSTMVR IGSSIFGGR
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