| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3448 |
|---|
| Symbol | |
|---|
| ID | 5089649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4115202 |
|---|
| End bp | 4116089 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644742873 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_001195781 |
|---|
| Protein GI | 146301190 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TAGCTGTAAT TGGAGCAGGA ACAATGGGTA ACGGAATTGC CCACACTTTT
GCACAAAGCG GATTTACCGT AAAATTAATC GATGTTTCTG AAAAATCATT AGATAAAGGA
ATGGCAACAA TTGCTGCCAA CTTAGACCGT ATGTTATCTA AAGGAACGAT TACTCAGGAA
GATGTTGCCA AAACTATTAC CAATATCATC ACTTATACAG ATTTAAAAGA CGGTGTTGTT
GGAGTTGATT TAGTAGTAGA AGCAGCAACT GAAAACGTTG AATTAAAACT AAATATATTT
AAGCAATTAA ACGAATATTG CTCGCACAAT ACCATTTTAG CAACCAATAC TTCTTCTATT
TCAATTACAC AAATCGGAGC TGTTGTGGCA CATCCTGAAC GTGTTATCGG AATGCACTTT
ATGAATCCTG TACCGATCAT GAAATTGGTT GAAATCATCC GCGGATATAA TACCAGCGAT
GAAGTAACTA AAATCATCAT GACTTTATCT GAAAAATTAG GTAAAGTTCC TGTAGAAGTA
AACGATTATC CAGGTTTTGT AGCAAACAGA ATTTTAATGC CAATGCTAAA CGAAGCCATC
GAAACGTTAT ATAATAAAGT TGCCGGAGTT TACGAAATAG ATACGGTAAT GAAATTAGGA
ATGGGACACC CAATGGGACC ACTTCAATTG GCCGATTTTA TTGGACTTGA TGTTTGTCTT
GCAATTCTAA ATGTAATGTA CGACGGATTC AAAAATCCTA AATATGCTCC TTGCCCGCTT
TTAGTAAATA TGGTAAGAGC TGGTAAACTT GGGGTTAAAT CCGGTGAAGG TTTTTACGAT
TACAGCGAAA GCAAAAAAGC TGAGAAAATC TCGAAACAGT TTTTATAA
|
|---|
| Protein sequence | MKTIAVIGAG TMGNGIAHTF AQSGFTVKLI DVSEKSLDKG MATIAANLDR MLSKGTITQE
DVAKTITNII TYTDLKDGVV GVDLVVEAAT ENVELKLNIF KQLNEYCSHN TILATNTSSI
SITQIGAVVA HPERVIGMHF MNPVPIMKLV EIIRGYNTSD EVTKIIMTLS EKLGKVPVEV
NDYPGFVANR ILMPMLNEAI ETLYNKVAGV YEIDTVMKLG MGHPMGPLQL ADFIGLDVCL
AILNVMYDGF KNPKYAPCPL LVNMVRAGKL GVKSGEGFYD YSESKKAEKI SKQFL
|
|---|
| |