Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3389 |
Symbol | |
ID | 5093637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4047011 |
End bp | 4049227 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644742814 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_001195722 |
Protein GI | 146301131 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.461339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAAA ACGTTAAAAC AATCGTTGTT TTAGTTTTAT TGAGTTCATT CGGATTGAAT GCACAAAATA AAGTTCCGGT TTATCTTGAT GATAAGAAGC CAATTGATGA GCGTGTAGAA GATGCGCTTA AAAGAATGAC AACCGAAGAG AAAATTGCCA TGATCCATGC GCAGTCTAAA TTTAGTTCAC CTGGAGTGAA ACGTCTTGGA ATTCCTGAAA ACTGGATGAC CGACGGACCT CACGGAATTC GTACTGAAGT AAAATGGGAT GAATGGGATC AGGCTGGATG GACAAATGAC TCTTGTATCG CATTTCCGGC TTTAACAGCT CTTTCTTCAA CATGGAACAA AGAACTATCT TCTTTATACG GAAAATCAAT TGGAGAAGAA GCACGTTATC GTAACAAAAA TGTACTATTA GGACCAGGAG TAAACATTTA CAGAAGTCCA TTAAACGGCC GTAATTTCGA ATACATGGGA GAAGATCCGT TTTTGGCTGC AAAAATGGTT GTACCTTATA TTAAAGGAGT ACAGGCAAAC GGTGTTGCTG CTTGTGTAAA ACACTTTGCA TTAAACAATC AGGAAACAAA CCGTAATTCT GTAAACGTAA TCGTTGACGA TCGTGCATTA TACGAAATTT ATCTTCCGGC TTTTAAAGCT GCAGTTCAGG AAGGCGATGT TTGGTCGATT ATGGGATCTT ACAACAAATA CAAAGGACAG CAATGCTGCC ACAACGAATA TTTGTTAAAC GATATTCTTC GAGATGAATG GGGCTTTAAA GGTGTTGTAG TTTCAGACTG GGGAGGAGTA AATGATACCA AACAAGCTAT TCACAATGGT CTTGATATGG AATTTGGTTC TTGGACGAAT GGTCTTTCAT GGGGAACAAG TAATGCTTAT GATAACTATT ACTTAGCAAA ACCGTATTCG GAAATGATTA AAAAAGGTGA AGTAGGCACA AAAGAGTTAG ACGAAAAAGT ACGTCGTATT TTACGTTTAT CTTTCTTGAC TACGATGGAT AGAAATCGTC CGTTTGGATC TTTTGGAACA CAAGAACACG CTGATGCAGG CCGTAAAATT GCCGAAGAAG GAATTGTATT ATTACAAAAC AACAATAACA TTCTGCCAAT TAACCTTTCT AAAACTAAGA AAATTGCAGT AATTGGAGAA AATGCTATTA AAATGATGAC AGTAGGAGGA GGAAGTTCTT CTCTTAAAGC TAGATACGAA ATTACACCTC TTGAAGGTTT AAAGAAAAGA ATTGGCAACC AGGCAGAAAT CGTGTATGCA CGAGGTTATG TGGGAGATCC AACAAGTAAC TACAACGGAG TTGTTGCAAA AGTAAGCTTA GAAGAAAAAC GTCCACAGGC TGAATTAACT GCCGAAGCTT TAAAAGCTGC TAAAGATGCA GATATCGTTC TTTTTATTGG AGGTTTGAAC AAAAGTCCAA ATCAGGATGA CGAAGGACAC GATCGTAAAC AATTAGAATT GCCTTATGGT CAGGATAAAT TAATCAGCGA ATTAGCAAAA GTAAATAAAA ACATTGTTTT TGTAAATATT TCAGGAAATG CAGTTGCAAT GCCGTGGGTA AAAGAAGTTC CTGGAATTGT TCAGGGATGG TTTTTAGGAA CTGAGGCTGG AAACGCTTTA GCAAATGTTT TAGTTGGAGA CGTAAACCCT TCTGGAAAAC TTTCTTTTAC TTTCCCTGTA AAATTAGCTG ATAACGGAGC TCATGCTTTA GGAGAATTTC CAGGCGGCGA TGAGGTAAAA TACAACGAAG GAATTTTTGT TGGATACCGC TGGGTTGATA AAAATAAAGT TAAACCATTG TTTCCTTTCG GACACGGATT AAGCTACACA ACTTTTGCTT ACGGAAAAGT AACAGCTGAT AAAAAACAAC TTTCAAGCAG TGATAAAATT ACATTTTCTG TGAATGTGAA AAATACAGGA AGCAGAGAAG GATCTGAAGT TGTTCAGCTT TATATCAGCG ATTTAAAATC TTCATTACCA CGTCCGGTAA AAGAATTAAA AGGATTTGAA AAAGTTTCGC TAAAAGCGGG AGAAGAAAAA ACAGTTACGT TTACTATCGA TAAAACGGCT TTAAGTTTCT TTGATGATAA AAAACACGAC TGGGTTGCAG AACCGGGAGC TTTTGAAGCA ATTGTTGGAG CATCTTCAAC AGATATAAAA TCGAAAGTGG GCTTCTCACT TCAATAA
|
Protein sequence | MFKNVKTIVV LVLLSSFGLN AQNKVPVYLD DKKPIDERVE DALKRMTTEE KIAMIHAQSK FSSPGVKRLG IPENWMTDGP HGIRTEVKWD EWDQAGWTND SCIAFPALTA LSSTWNKELS SLYGKSIGEE ARYRNKNVLL GPGVNIYRSP LNGRNFEYMG EDPFLAAKMV VPYIKGVQAN GVAACVKHFA LNNQETNRNS VNVIVDDRAL YEIYLPAFKA AVQEGDVWSI MGSYNKYKGQ QCCHNEYLLN DILRDEWGFK GVVVSDWGGV NDTKQAIHNG LDMEFGSWTN GLSWGTSNAY DNYYLAKPYS EMIKKGEVGT KELDEKVRRI LRLSFLTTMD RNRPFGSFGT QEHADAGRKI AEEGIVLLQN NNNILPINLS KTKKIAVIGE NAIKMMTVGG GSSSLKARYE ITPLEGLKKR IGNQAEIVYA RGYVGDPTSN YNGVVAKVSL EEKRPQAELT AEALKAAKDA DIVLFIGGLN KSPNQDDEGH DRKQLELPYG QDKLISELAK VNKNIVFVNI SGNAVAMPWV KEVPGIVQGW FLGTEAGNAL ANVLVGDVNP SGKLSFTFPV KLADNGAHAL GEFPGGDEVK YNEGIFVGYR WVDKNKVKPL FPFGHGLSYT TFAYGKVTAD KKQLSSSDKI TFSVNVKNTG SREGSEVVQL YISDLKSSLP RPVKELKGFE KVSLKAGEEK TVTFTIDKTA LSFFDDKKHD WVAEPGAFEA IVGASSTDIK SKVGFSLQ
|
| |