Gene Fjoh_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3336 
Symbol 
ID5092943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3986618 
End bp3987721 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content35% 
IMG OID644742763 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001195671 
Protein GI146301080 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGG AAATAATACA AAAATATCTT TCTAACGAAG CTTCAGAACA AGAAGTTCAG 
GCACTTTTTG AATGGATTGA AGCATCGGAA GATAATAAAA AACAATTTGT AACGGCAAAG
AAAGCGTGGG TTCTTTCCGG CTTATCTGAA GATATTTTAA GTGATTCTGT TCCATTAATT
CAAATGAAAC CAAAAAACAG GCTGAAGCAG TACTTAAGTT ATGCTGCAGT ATTTTTAGTT
TTGATTGGAT TAGGAAAAAC TATTTTATTA TTTACCGATA CCTCTAAAAC ATCAAAAGAA
ATTGTTCTGG AAATGGGCGA CGGCCGTTTA GAATATTTTT CTGGAAAAAA TCAAACCACT
TTGGTAAATG ACAAAGGAGA TTTAGTGGCC AAAAAATTTC CTGATGAAAT CATTTATTTT
GGTAAAACTG CTGCTGATAA AGTAGTTTAC AATACGCTTA CTATTCCGTA TGGAAAACGT
TTCAAACTTA GACTTTCGGA TGGTACTATC GTGAGTTTAA ACGCCGGAAG TTCTTTACGT
TATCCGGAAC AATTTAGCAA TAACGGAAAC CGAAATGTGT ATTTAACCGG AGAAGCTTTT
TTTGAAGTGG CCAAAGATAA AGAGCATCCG TTTATTGTAA ACGCCAATCA GGTTGATATT
AAGGTTCTTG GGACAAAGTT TAATGTGAGC GCTTATCCTG AAAATCCTAC TGTTAACAGT
ACTTTGATAG AAGGAAGCAT TCAAATGTCT GAAACTGCCA ATCCTTCGAA TGTTATTTTG
CTTGAACCAA ACCAAATGGC AACATGGCAG AATAACGCTA AAAAAATTAC CCTCAAAAAT
GTTGATGTTT CTCTTTACTC GGCTTGGACT AAAGGAGAAC TGGCATTTAA AGACACCCCA
TTTTCTACAA TCGCTAAAAT TATTCAGCGT ACCTACGACG TTGAAATTAT CAATCAAAAT
TCTGATTTGG CCAGACAGAA TTTTACTGGT ACAATAAATA TAAGCGAATC TAGTGTCGAA
AACATTTTAG ACCTGCTAAA ACGCGACACT CCTTTTAACT ATTCAATTGA ACATAAAACA
ATTACGATCA CCAATCCTCG ATAA
 
Protein sequence
MTSEIIQKYL SNEASEQEVQ ALFEWIEASE DNKKQFVTAK KAWVLSGLSE DILSDSVPLI 
QMKPKNRLKQ YLSYAAVFLV LIGLGKTILL FTDTSKTSKE IVLEMGDGRL EYFSGKNQTT
LVNDKGDLVA KKFPDEIIYF GKTAADKVVY NTLTIPYGKR FKLRLSDGTI VSLNAGSSLR
YPEQFSNNGN RNVYLTGEAF FEVAKDKEHP FIVNANQVDI KVLGTKFNVS AYPENPTVNS
TLIEGSIQMS ETANPSNVIL LEPNQMATWQ NNAKKITLKN VDVSLYSAWT KGELAFKDTP
FSTIAKIIQR TYDVEIINQN SDLARQNFTG TINISESSVE NILDLLKRDT PFNYSIEHKT
ITITNPR