Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2808 |
Symbol | |
ID | 5093253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 3341092 |
End bp | 3343209 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644742238 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001195149 |
Protein GI | 146300558 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAG AACTACTACA CGCCAAACTA AAGGAAAATT TTGGATTTGA AAAATTCAGA CCCAATCAGG AGACTATCAT TACTACAGTA TTGTCTGGTA ATGATGCACT GGCAATTATG CCAACCGGAG GAGGAAAATC AATATGTTTT CAATTGCCAG CCCTTGTACT GCCAGGAATA ACGATTGTAA TTTCACCTCT GATCGCTTTA ATGAAAGATC AGGTTGACAG TTTAAAATCA AATGGTATTT CAGCTTGTTA CATCAACAGT AGCCAATCTT CAGAAGAACA GCAGTATTAT ATAGACAATT TAAAAACGAA TACTTTTAAA CTTGTTTACA TTGCGCCTGA AAGTTTATCG TATTTAGACA CCATTTTTAG CGAATTAACT ATTAGTTTAA TCGCAATCGA CGAAGCACAT TGTATTTCAT CCTGGGGACA CGATTTCAGG CCGGCTTATA CCAATTTGGG TTATTTAAAA AACCGCTTCC CTTCTACTCC TGTTTTGGCT TTAACAGCAA CTGCCGATAA AGCGACACGT GTTGATATTA CAAAACAGCT CAATTTAAAA AATCCGAAAA CTTTTGTAGC TTCTTTTGAC CGAAAAAATT TAAGTCTTGA AGTACGCCCT GCATTAGACC GTGTAAAACA AATTATTGAC TTTGTAGAAA ATAAGCCAAA TGAATCCGGA ATAATCTATT GTTTAAGCCG AAAAACAACC GAAGAACTTG CTGAAAAATT AGCAAAAAAC GGAATTGCAG CAAAAGCCTA TCATGCAGGC TTAGACAATA CAACCCGTGC CAAAACACAA GATGAATTTA TAAACGACGA TTGTCAGGTT GTATGTGCCA CGATTGCATT TGGGATGGGA ATTGATAAAT CAAATGTACG ATGGGTAATT CATTATAATC TTCCTAAAAA CATAGAAGGG TATTATCAGG AAATTGGCCG TGCGGGTCGT GACGGCCTTC CGGCTGAAAC GGTTTTGTTT GAAAGTTATG CAGATGTAAT TCAACTTCAA AAATTTGCTT CGGATGGATT GAATGCAGAT GTGCAGCTTG CCAAATTAGA CCGAATGAAA CAATATGCCG ATGCTGTAAG CTGCAGACGA AAGATTCTGC TTTCTTATTT CGGTGAATTG GTGACAGAGA ATTGCGGTAA TTGTGATATT TGCAAAAATC CGCCAACTTT TTTCGATGGG ACGATTCTCG CACAAAAAGC CCTTTCTGCA ATTACAAGAT TACAGGAGTC TGAGCCTTTG GCAGTAATTG TTGATTTTTT AAGAGGCTCG AGAAACGCGT ATATCTACGA AAAAAATTAT CAGGAGCTAA AAACGTACGG AATTGGCGCT GACATTTCGT GGTACGACTG GAATCAATAT TTAATTCAGC TTATTAATTT AGGATATTGC GAAATTGCCT TTCATCAGCA TAATAAAATT TTATTGACGC CTTTTGCTAA AAAAGTTTTA TTTGAAGGCG AAAAAGTAAA GCTTACAACA GTTGTCAAGA AAGTAATTGA TAAAAATGAA ATAAAACAAG AGAAAGCAAA AGCTGTTAAA AATTCTCTTT TTGAAACCCT TAGAAAATTA CGTTATGAAA TTGCTAAAGA AGAAGAAGTT CCGGCATATG TAATTTTCAG CGATGCATCT TTGAGACAAA TGGAAATCTT AAGACCAATG AGCGATGAAG AATTTCTGGC TGTTGAAGGT GTTGGAAAAG CAAAACTTGA AAAATACGGT GCAGAATTTA TCAATGCAAT TATTGAGTTT CAAAGAAATA AATCGGTTGT TAAAAAAGAA AAAAAAGACA GCACTTATAA AAAAACGCTA GAATTATTTC AAAGCGGTAG TTCTGTCGAA GAAATTGCAG AAAGAAGAAG CATCAGCCAG ACAACTGTAG TTTCTCATAT TGCAAAATTA TATGTAGACG GATACGATTT AGATTTAAGT CAGTTTGTTT CTGATGAAGA AATTGCTGCA ATAGAAAAAG CACAAATTGA ATTAGAAAAG CCAAGTGCAT TAAAGCCTTA TTTCGATTAT TTTGAAGAAA AAATGTCTTA TGATAAAATT AGATTTGGTT TAGCAGTTGT TGAAAGAAAA TATCAAACAA TTCAATAA
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Protein sequence | MNSELLHAKL KENFGFEKFR PNQETIITTV LSGNDALAIM PTGGGKSICF QLPALVLPGI TIVISPLIAL MKDQVDSLKS NGISACYINS SQSSEEQQYY IDNLKTNTFK LVYIAPESLS YLDTIFSELT ISLIAIDEAH CISSWGHDFR PAYTNLGYLK NRFPSTPVLA LTATADKATR VDITKQLNLK NPKTFVASFD RKNLSLEVRP ALDRVKQIID FVENKPNESG IIYCLSRKTT EELAEKLAKN GIAAKAYHAG LDNTTRAKTQ DEFINDDCQV VCATIAFGMG IDKSNVRWVI HYNLPKNIEG YYQEIGRAGR DGLPAETVLF ESYADVIQLQ KFASDGLNAD VQLAKLDRMK QYADAVSCRR KILLSYFGEL VTENCGNCDI CKNPPTFFDG TILAQKALSA ITRLQESEPL AVIVDFLRGS RNAYIYEKNY QELKTYGIGA DISWYDWNQY LIQLINLGYC EIAFHQHNKI LLTPFAKKVL FEGEKVKLTT VVKKVIDKNE IKQEKAKAVK NSLFETLRKL RYEIAKEEEV PAYVIFSDAS LRQMEILRPM SDEEFLAVEG VGKAKLEKYG AEFINAIIEF QRNKSVVKKE KKDSTYKKTL ELFQSGSSVE EIAERRSISQ TTVVSHIAKL YVDGYDLDLS QFVSDEEIAA IEKAQIELEK PSALKPYFDY FEEKMSYDKI RFGLAVVERK YQTIQ
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