Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2324 |
Symbol | |
ID | 5090679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2792037 |
End bp | 2792957 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644741752 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001194670 |
Protein GI | 146300079 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG AAGATCATAC TCCGTATAAC ATTACCTCTA TTTCAGAATT ACATCAATTG TTACAAATTC CAAAACCAGA TCATCCTTTG GTAAGTTTTG TGAATATGAG AGATATAAGT TGTCAATTTG ATAATAATTT AAAGAGTGTG ATTTATAACT TCTATACGAT TTCGATAAAA AGAGGATTTA AAGGAAAAAT GAGATACGGT CAAAATTATT ATGATTTTGA TGAAGGAGTT ATGACATTTA TGGGGCCAGG CCAAGTTATT TCTACAGAAG TGCCAATGGA TTCTTCGGTA TCTGGCTCAA TGTTAGTCAT TCATCCTGAT TTTATTCAGA ATTATGCTTT GGCAAAAAAA ATAAAAGAGT ACGGATATTT CTCTTATGCT GTTAATGAGG CATTGCATCT TTCAGAAAAA GAAGAAACAA TGATTACAGG AATTATGCAG AATATCGAAC AAGAGTACCT GTCTTCTATT GATGCTTTCA GTCAAGATGT AATGGTTTCT CATATTGAAC TGCTTCTTAA TTATTGCAAT CGTTTTTACA ACCGACAGTT TATTACCCGA AAAAATGCAA ACAATACGCT TTTAACTAAA CTGGAACTTC TTCTTTCTGA ATATTTTGAA AGTGATAAAG TTGAGAAATT AGGATTACCA ACTGTCGCGT ATATTTCAGA ACAATTAAAT GTTACGCCAA ATTATCTCAG CGATATGCTG CGCTCGCTGA CCGGACAAAG CACACAGCAT CATATTCATA ATAAAATTAT TGAAAAGGCA AAAGAACTTC TTACCACAAC TACCCTGAGT GTAAGTGAAA CTGCTTATAA ATTAGGTTTC GAATATCCGC AATCTTTTAA TAAACTTTTC AAAAGTAAAA CCGACCTTTC ACCTTTAGAA TTTAGAAATT CATTTAATTA A
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Protein sequence | MKKEDHTPYN ITSISELHQL LQIPKPDHPL VSFVNMRDIS CQFDNNLKSV IYNFYTISIK RGFKGKMRYG QNYYDFDEGV MTFMGPGQVI STEVPMDSSV SGSMLVIHPD FIQNYALAKK IKEYGYFSYA VNEALHLSEK EETMITGIMQ NIEQEYLSSI DAFSQDVMVS HIELLLNYCN RFYNRQFITR KNANNTLLTK LELLLSEYFE SDKVEKLGLP TVAYISEQLN VTPNYLSDML RSLTGQSTQH HIHNKIIEKA KELLTTTTLS VSETAYKLGF EYPQSFNKLF KSKTDLSPLE FRNSFN
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