Gene Fjoh_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2324 
Symbol 
ID5090679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2792037 
End bp2792957 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content32% 
IMG OID644741752 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001194670 
Protein GI146300079 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG AAGATCATAC TCCGTATAAC ATTACCTCTA TTTCAGAATT ACATCAATTG 
TTACAAATTC CAAAACCAGA TCATCCTTTG GTAAGTTTTG TGAATATGAG AGATATAAGT
TGTCAATTTG ATAATAATTT AAAGAGTGTG ATTTATAACT TCTATACGAT TTCGATAAAA
AGAGGATTTA AAGGAAAAAT GAGATACGGT CAAAATTATT ATGATTTTGA TGAAGGAGTT
ATGACATTTA TGGGGCCAGG CCAAGTTATT TCTACAGAAG TGCCAATGGA TTCTTCGGTA
TCTGGCTCAA TGTTAGTCAT TCATCCTGAT TTTATTCAGA ATTATGCTTT GGCAAAAAAA
ATAAAAGAGT ACGGATATTT CTCTTATGCT GTTAATGAGG CATTGCATCT TTCAGAAAAA
GAAGAAACAA TGATTACAGG AATTATGCAG AATATCGAAC AAGAGTACCT GTCTTCTATT
GATGCTTTCA GTCAAGATGT AATGGTTTCT CATATTGAAC TGCTTCTTAA TTATTGCAAT
CGTTTTTACA ACCGACAGTT TATTACCCGA AAAAATGCAA ACAATACGCT TTTAACTAAA
CTGGAACTTC TTCTTTCTGA ATATTTTGAA AGTGATAAAG TTGAGAAATT AGGATTACCA
ACTGTCGCGT ATATTTCAGA ACAATTAAAT GTTACGCCAA ATTATCTCAG CGATATGCTG
CGCTCGCTGA CCGGACAAAG CACACAGCAT CATATTCATA ATAAAATTAT TGAAAAGGCA
AAAGAACTTC TTACCACAAC TACCCTGAGT GTAAGTGAAA CTGCTTATAA ATTAGGTTTC
GAATATCCGC AATCTTTTAA TAAACTTTTC AAAAGTAAAA CCGACCTTTC ACCTTTAGAA
TTTAGAAATT CATTTAATTA A
 
Protein sequence
MKKEDHTPYN ITSISELHQL LQIPKPDHPL VSFVNMRDIS CQFDNNLKSV IYNFYTISIK 
RGFKGKMRYG QNYYDFDEGV MTFMGPGQVI STEVPMDSSV SGSMLVIHPD FIQNYALAKK
IKEYGYFSYA VNEALHLSEK EETMITGIMQ NIEQEYLSSI DAFSQDVMVS HIELLLNYCN
RFYNRQFITR KNANNTLLTK LELLLSEYFE SDKVEKLGLP TVAYISEQLN VTPNYLSDML
RSLTGQSTQH HIHNKIIEKA KELLTTTTLS VSETAYKLGF EYPQSFNKLF KSKTDLSPLE
FRNSFN