Gene Fjoh_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2279 
Symbol 
ID5094414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2749059 
End bp2750207 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content34% 
IMG OID644741707 
Productamino acid permease-associated region 
Protein accessionYP_001194625 
Protein GI146300034 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.665264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTGAAA ATATCATCCT AAAAAACAAA TTCAAGAAAT GTCAGATTCT CCAAAAAATC 
AATGGCGGAT CTTATAATTA TATTAAAAGA GCTTTGGGTG ATTATGCCGG ATTTCTTTCA
GGATGGTACG ATTATATTGT AAATGCCATC CCTCCTGCTT TTTACTGTAT TGTAATCAGC
GAATACACCA TTATTTTATT TCCGCAATTA GCACATTATT CTACCGTATT ATCTATTTCT
TTATTGGTTG CATTTGTATT ATTGCATTTA AGCGGCGTAA AAAACGGAAG CGTCATTCAG
CAGATTACCA GTTTCTTAAA AGTAATTTGC TTTGTAGCTT TGGTTACGGC TTGTTTTATG
TATTCTGGAG TTGAAGTTCC GCCAATCAAA ACAGATAATT CAATTTTTCA AATCGGACTT
ATTTTCGGAT TCTTCAAATC TTTACAGCTT ATTATTGGGA CTTACAACGG CTGGAACGGT
GTTTGTTTTT TTGCTGAAGA AAATGAAAAT CCAAGCAAAA ATATTCCGAA ATCTTTGTAC
AGCGGCGTTC TGCTTGTTGT AGCCATTTAT ATTTTGGTAA ATGCAGCTTT TTTTCACGTT
CTCCCAATCG AAACTATAGC AAAATCGAAT CTGGCTGCTG CCGATGTTGC AAAAATTCTT
TTCGGTGACA GCGGAGCTAA AATCGTTACC ATAATTTCTA TTTTCTCCTT AATTAGTATT
TTGAATGCGT TTATGATGAT TCCGCCAAGA ATTTTGTACG GATTAAGTCG TGACGGATTT
TTTATCGAAA AAGGAACTCA AGTCAATAAA GGCGGAACAC CAATTGTTGC GCTTTTGGTT
TCATCATTTT TCAGTTTGTT TTTAATCTGC ATTGGTTCTT TTGAAGTCTT ATTTTCTTTT
GCAGCTTTTA TCTCGATAAT CGTTTGGGGA CTGGCCTATT ATTCACTTTT AAAACTAAGA
ACTACAGAAC CGGATCTACC AAGACCCTAT CGTTCTTTTT GGTATCCGTG GACAACTATA
ATAGCGATTA TATTTTCTAT CGCATTACTT GCTGGATTCA TTTACAGCGA CCCTAAAAGC
TTTATTATTA TTGTTGGAAT TGCAATTGTT TCTTATCCTT TGTTTTTGGT TTTGAAGAAA
CAAAAATAA
 
Protein sequence
MPENIILKNK FKKCQILQKI NGGSYNYIKR ALGDYAGFLS GWYDYIVNAI PPAFYCIVIS 
EYTIILFPQL AHYSTVLSIS LLVAFVLLHL SGVKNGSVIQ QITSFLKVIC FVALVTACFM
YSGVEVPPIK TDNSIFQIGL IFGFFKSLQL IIGTYNGWNG VCFFAEENEN PSKNIPKSLY
SGVLLVVAIY ILVNAAFFHV LPIETIAKSN LAAADVAKIL FGDSGAKIVT IISIFSLISI
LNAFMMIPPR ILYGLSRDGF FIEKGTQVNK GGTPIVALLV SSFFSLFLIC IGSFEVLFSF
AAFISIIVWG LAYYSLLKLR TTEPDLPRPY RSFWYPWTTI IAIIFSIALL AGFIYSDPKS
FIIIVGIAIV SYPLFLVLKK QK