Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2130 |
Symbol | |
ID | 5093891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2578206 |
End bp | 2580137 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644741559 |
Product | amino acid permease-associated region |
Protein accession | YP_001194477 |
Protein GI | 146299886 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.345831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAT CAAGTTTATT CCGAAAGAAA ACAGTACAGG ATATTCTGAA GCAGGTTGCT CAGAATGAAA CAGACGGTCA TAATGCCTTA GGAAAACATT TGACAACTAA GGATTTAACA GCCTTCGGAA TAGCGGCGAT TGTTGGAGCG GGAATTTTCA GCACGATTGG AAAAGCCAGT GCAGACGGCG GACCAGCTGT AATTTTCTTG TTCTTATTTA CTGCTTTGGC TTGTAGTTTT GCTGCCTTTG CTTACGCCGA ATTTGCATCG ATGGTTCCGG TTTCAGGAAG TGCTTATACG TATTCTTATG TTGCTTTTGG AGAATTAATT GCCTGGATAA TCGGCTGGGC TTTAATTATG GAATATGCCG TTGGAAACAT TACTGTTGCC ATATCGTGGA GTGATTATTT TACCGGACTG CTCCAGAGTG GCGGTATTCA TCTCCCGCAA TGGATTCAGA TGGATTATTT AACCGCTTCA AACGGTTTTA AAGATGCTGA AGCTTTAATA AGTGCAGGAA AATCTCCTGA AAATTTAAGT TTAGCTTTAC AACAAGCGCG AGAGGCTTGG ATAACTGCCC CAACAATTGG TTCTTTTCAT TTTGTGACTG ATTTACCGGC ATTATTTATC ATTATTTTGA TTACAGCATT GGTGTATAGA GGAATGAAAG AATCTCGTAA CGCCAGTAAC TTAATGGTGG TTGTAAAACT ATGCGTGGTT CTTTTAGTAA TTGCAGTTGG GGTATTTTAT GTTGATACAG CAAATTGGGA TCCGTTTGCT CCAAATGGAG TTGGAGGGGT TTTAAAAGGA GTTTCAGCAG TTTTCTTTGC CTATATTGGT TTTGATGCAA TTTCTACAAC CGCAGAAGAA TGTAAAAATC CGCAGAGAGA TTTACCACGC GGCATGATGT GGGCTATTAT TATTTGTACA ATTCTTTATA TTGCTATTGC TTTGGTTTTA ACCGGAATGG TAAAATATCA CGAATTAAAT GTTGGAGATC CTCTTGCATT TGTTTTCGAC AAATTAGACC TAAAATGGAT GTCAGGAATT ATTGCTGTGA GTGCAGTAGT GGCAATGGCG AGTGTTTTAT TGGTTTTTCA AATGGGACAG CCTCGTATAT GGATGAGTAT GAGCCGTGAT GGTTTATTAC CAAAGAAATT TTCTACAGTT CACCCAAAAT TCAAAACACC ATCTTTTGCT ACAATTGTAA CAGGTTTTGT AGTGGCAATT CCGGCATTAT TCTTAAATCT TACAATGGTA ACTGATTTAT GCAGTATCGG AACATTATTT GCCTTTGTAT TAGTTTGTGC AGGAGTTTTA GTGTTGCAAA ACAAGCCAGA AATTCCGAGA GGAAAATTCA AAACGCCTTA TATCAATTCA AAATTTATTC TGCCAGTTTT AATGATTGCG GGATTGTATT ATGCTTTTGC ATTCAACAAT AAAGCAACAA TGGCGTTTAT CAATAACGAT CCGCAGATTT ACGATGCAAC TTCAATTGTT ACTTCTTTAG ATAAATCAGA ATCAGAGCAG GTTTTTAAAT ATTTAGAAAG TATCGAAGTA AACAATAAAA CTGCTGAAAC ATCAGATTTA GAGCATTTAT TAGGACAATA CCAAGACGAC GAAGCAAAAT ATGCTGAAGT GGTAAAAGGA TTGCCAATTG CAGATTCTGC AAAATATGAA TCAGGTTTTG GTTTGTTCAA ACACAAAATA CCAATGTGGA TTTTCCTATT CGTTTTAGTT GGATTAGCTG TTTGGGCTTT TAGAAGAAAC TTGTCTTTAA TTCCGCTATT AGGATTAATC TGCTGTTTGT ATATGATGGC CGAATTAAGC GTTTGGAACT GGATTTATTT TACAATCTGG TTATTAATTG GACTATTAAT CTACTTTACT TACAGTAGAA AAAACAGTAA ACTAAACGTA GGTAATTATT AA
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Protein sequence | MALSSLFRKK TVQDILKQVA QNETDGHNAL GKHLTTKDLT AFGIAAIVGA GIFSTIGKAS ADGGPAVIFL FLFTALACSF AAFAYAEFAS MVPVSGSAYT YSYVAFGELI AWIIGWALIM EYAVGNITVA ISWSDYFTGL LQSGGIHLPQ WIQMDYLTAS NGFKDAEALI SAGKSPENLS LALQQAREAW ITAPTIGSFH FVTDLPALFI IILITALVYR GMKESRNASN LMVVVKLCVV LLVIAVGVFY VDTANWDPFA PNGVGGVLKG VSAVFFAYIG FDAISTTAEE CKNPQRDLPR GMMWAIIICT ILYIAIALVL TGMVKYHELN VGDPLAFVFD KLDLKWMSGI IAVSAVVAMA SVLLVFQMGQ PRIWMSMSRD GLLPKKFSTV HPKFKTPSFA TIVTGFVVAI PALFLNLTMV TDLCSIGTLF AFVLVCAGVL VLQNKPEIPR GKFKTPYINS KFILPVLMIA GLYYAFAFNN KATMAFINND PQIYDATSIV TSLDKSESEQ VFKYLESIEV NNKTAETSDL EHLLGQYQDD EAKYAEVVKG LPIADSAKYE SGFGLFKHKI PMWIFLFVLV GLAVWAFRRN LSLIPLLGLI CCLYMMAELS VWNWIYFTIW LLIGLLIYFT YSRKNSKLNV GNY
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