Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2128 |
Symbol | |
ID | 5093889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2573697 |
End bp | 2574509 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644741557 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001194475 |
Protein GI | 146299884 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATT TCGTTCAGGA TGTCTTTAAG CATTTAGAAA ACTATTATTA CAGTATTGTA GATCTTACGC CAAAATTTAT TCTGGCCGTT TTAGTTGTTC TCGTTTCGTG GTTTATCGCA AGCCGAGTGG GCATTTTTGC CGGAAACCGA CTCAAAGTGA AAATGCACGA TCGCCTTCTG GCAGTTTTTA TTGCACGTTT AATAAAATCG GTTTTAATTA TTATTGGAAT CTTATTTATG TTCCGAATTA TTGGTCTTGA AGGCGTTGCC CAAAGCATGC TTGCCGGAGC GGGAATTTCG GCTTTTGTAA TTGGTTTTGC ACTTAAAGAT ATTGGAGAAA ATTTTCTTGC CGGAATTCTT CTGGCTTTCA AACGTCCGTT TTCTATTGGC GATATTATCG AAAGCAACGG CGTAAAAGGC GAAGTCATCA ACCTCAACCT GCGCGATACC GAAGTAAAAA GCGACTCGAA AATCATATAT ATTCCAAATG CGCTTCTTAT AAAAAACACG CTCATTAACT ACAACAGTGA AGGTTTTCTG CTTCAGACTT TCACAGTTGG GCTTGAATAT GGTTCTGATT ATACCCGCGC CATCGAACTC GTAAAAGAAG TTCTTGGAAA CAGCGAAGAT GTAACCAAAA AAGACCACGA AAATGCAGCC GTAATTACCG ATGTTGCCGC TGCGGGTGTT ATTCAGCTCA ATATTCGGTA TTGGGTTAAA ACGGCATCAA CGGCTGAAAA TTCAGAATGC CGCTCTAAAA TTATTGCCGC AGTTTTAAAG AAATTGAAGG AAAATGAGTT TGTGTTGAAA TAG
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Protein sequence | MENFVQDVFK HLENYYYSIV DLTPKFILAV LVVLVSWFIA SRVGIFAGNR LKVKMHDRLL AVFIARLIKS VLIIIGILFM FRIIGLEGVA QSMLAGAGIS AFVIGFALKD IGENFLAGIL LAFKRPFSIG DIIESNGVKG EVINLNLRDT EVKSDSKIIY IPNALLIKNT LINYNSEGFL LQTFTVGLEY GSDYTRAIEL VKEVLGNSED VTKKDHENAA VITDVAAAGV IQLNIRYWVK TASTAENSEC RSKIIAAVLK KLKENEFVLK
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