| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1995 |
|---|
| Symbol | |
|---|
| ID | 5094357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2328556 |
|---|
| End bp | 2329719 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644741421 |
|---|
| Product | mannonate dehydratase |
|---|
| Protein accession | YP_001194346 |
|---|
| Protein GI | 146299755 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1312] D-mannonate dehydratase |
|---|
| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAA CCATGAGATG GTTCGGACCA AACGACAATG TCAAATTAAT TGACATTCGG
CAAGCTGGCG CAGCGGGAAT TGTAACCGCA TTGCATCAAA TTCCGGTTGG CGATGTCTGG
ACAGTTGATG CAATAAAAGA AAGACAGGAA ATTATTCGTA ATTCCGGCTT GGAATGGACT
GTGGTTGAAA GTCTTCCTGT TCATGAAGAA ATTAAACGAG CTTCTGGAAA TTATCTGCAA
TACATCGAGA ATTATAAAAT CAGTTTGCAA AATCTGGCAG AATGCGGTAT CAAAATCATT
ACCTATAATT TTATGCCGAT TTTGGATTGG GTTCGAACGA ATCATAATTT TATCAATGAA
GATGGAAGCA GAGCTTTGCT TTACAATCAG GATGCATTTA CTTATTTTGA TGTTTTTCTT
TTAAAAAGAC CAAATTCAGA AAACGATTAT TCAGATGCTG AAAAAGAAAA AGCTTTGCAG
TTTGGGAATC AATTGTCTGA AGATGAAAAA GCACTTTTGT TTAAAAATGT TTTATTAGGA
CTGCCGGGAA GTAAAATCAA TTTTACGGCC GAACAGATTT TGTCTCTTTT AGAAAATTAT
GCCGAAATCG ACAATCAAAA ACTAAGAGAA AATCTGATTT ATTTTTTATC AGAAGTAACT
CCGATTGCGG AGAAAAACCA ACAAAAATTA GCGATTCATC CAGATGATCC GCCGTTTTCG
GTTTTAGGAC TTCCGAGAAT TGTTTCAACC GAAGCCGATT TAAAAGCTAT TTTTAATGCC
GTTCCTTCAA CTGCCAATGG TTTATGTTAT TGTACAGGTT CGTTAAGTGC AGACCCAAAA
AACAATCTTG AAAAAATTAT AGCCGATTTT GGAGATAGAA TTCACTTTTT ACATCTTCGA
AATACCATCC GCGAAAGCGA AACTATTTTT AGAGAATCAG AGCATTTAAA CGGTGACGTT
AAAATGGAAA TTATCGTTGA GAAATTATTG CTGTTGATGA ACAAAACCCA AATAAGCCTG
CCAATGCGTC CCGATCATGG TTTCCTTCAC AGAGTTGATG AAGCAATAGA AACCTATCCG
GGTTATTCTT TGACAGGAAG ACTAAAAGGG CTTGCTGAAT TAAGAGGTTT AGAAATGGGA
ATTGCTTATA AACTGAATTT GTAA
|
|---|
| Protein sequence | MQQTMRWFGP NDNVKLIDIR QAGAAGIVTA LHQIPVGDVW TVDAIKERQE IIRNSGLEWT
VVESLPVHEE IKRASGNYLQ YIENYKISLQ NLAECGIKII TYNFMPILDW VRTNHNFINE
DGSRALLYNQ DAFTYFDVFL LKRPNSENDY SDAEKEKALQ FGNQLSEDEK ALLFKNVLLG
LPGSKINFTA EQILSLLENY AEIDNQKLRE NLIYFLSEVT PIAEKNQQKL AIHPDDPPFS
VLGLPRIVST EADLKAIFNA VPSTANGLCY CTGSLSADPK NNLEKIIADF GDRIHFLHLR
NTIRESETIF RESEHLNGDV KMEIIVEKLL LLMNKTQISL PMRPDHGFLH RVDEAIETYP
GYSLTGRLKG LAELRGLEMG IAYKLNL
|
|---|
| |