Gene Fjoh_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1968 
Symbol 
ID5091704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2281869 
End bp2282642 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content34% 
IMG OID644741389 
ProductXRE family transcriptional regulator 
Protein accessionYP_001194319 
Protein GI146299728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.749676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTAT TTTCAGACAA CATCAGAGCA TTAAGGGTGA AGCATAAAAT ATCGCAGGAG 
AAATTAGCTG AAAACCTTAG TATTACCAGA GGAAGATACG TGAAATACGA AGATGGAACT
TCGGAAGCAC CGTATGACAT TTTAAAGAAA ATTGCGTTAT ATTTTCATAT GAGTATTGAC
TTGATATTAT CTGTCGATAT ACGCAAAATT GATGTACAAA ATTTGATAAA ACTGGAAGGT
AACCGACTTA TTCTTCCTAT TCAGGTTGAT AGTTTTGGAG AAAATTATAT CGAAATTGTA
TCTCAAAAAG CAAAAGCAGG ATATTTAAAC GGATATGCTG ATCCAGAATA TATTGAAAGT
TTACAGCAGA TTACACTTCC GTTTTTAGGA CCTGGAAAAC ATCGCGGATT TCCCGTTGAA
GGCGATTCAA TGCCTCCACA CGAAGATGGT TCTATTATTA TTGGCCGTTA TGTAGAAAAA
CTGGGAGAGG TTATGGATGG CAAAACCTAT ATTCTTATTA CTAAGAATGA AGGAATGGTA
TATAAGCGTC TCAATAAAAA CAAAAAGAAT GCCTTGGTTT TAGAATCGGA TAATAGTTTT
TATCCAAATT ATGAAGTGAA AGCTTCTGAT ATTTTGGAGA TTTGGGAATA CGAATGTAAT
ATCGGCCGTT CTGATAAGAA ACAAGAAATA ACAGAAACTG GAGCAATGAA AGATTTGCTT
TTAGAATTGA AAAGGGAAGT TCGAGAGATT AAGAATAATA CTTCGAATAC ATAA
 
Protein sequence
MSLFSDNIRA LRVKHKISQE KLAENLSITR GRYVKYEDGT SEAPYDILKK IALYFHMSID 
LILSVDIRKI DVQNLIKLEG NRLILPIQVD SFGENYIEIV SQKAKAGYLN GYADPEYIES
LQQITLPFLG PGKHRGFPVE GDSMPPHEDG SIIIGRYVEK LGEVMDGKTY ILITKNEGMV
YKRLNKNKKN ALVLESDNSF YPNYEVKASD ILEIWEYECN IGRSDKKQEI TETGAMKDLL
LELKREVREI KNNTSNT