Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1840 |
Symbol | |
ID | 5091465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2120633 |
End bp | 2121472 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644741254 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001194191 |
Protein GI | 146299600 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.205485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAATA ACAAAGTTTG GTTTATCACA GGTGCTTCAA AAGGACTTGG ATTAGAATTA GCTAAAAAAT TATTAGCAGA AGGTTTTAAA GTTGCTGCAA CATCAAGAAG TGAAGAGGCT TTAGTAAAAG TATTAGGAAA TTCATCTGAA AAATTTCTTC CTCTTGAAAT GGATTTAGTT GACGAGAAAA GTGTAAAAAG TGCAATCGAC AAAACTATCA ATCATTTTAA AACAATTGAT GTTTTGGTAA ATAATGCCGG TTATGGTTTA TTGGGAGCAT TGGAAGAATT AACAGACGCT GAATCAAGAA AAAACTACGA AGTAAATGTT TTCGGATTAT TGAATGTAAT TAGAAATACA ATGCCAATTC TTCGTGCAAA CAAATCTGGA CACATTTTTA ATATTTCTTC TGTAGGAGGT TATTATGGGG AATTTCCAGG CTGGGGAATT TACTGTTCTA CAAAATTTGC AGTTGCGGGT TTAACAGAAT CTTTAGCAGC AGAAGTAAAA TCGTTTGGAG TTCATGCTAC AATCGTGTAT CCGGGTTATT TTAGAACTGA TTTCTTAAAA GACAGTTCTT TATTACTGCC TCAAAACCCA ATTGCAGATT ATAAAGAAGT AAGACAATCT GAAAGCGCGC ACAAGGAAGA TATCAACCAA AATCAGCCGG GAGATCCTGT GAAATTAGCT GAAGCTTTGA TTAAAGCAAG CGAGGATCAA AATCCGCCTC TGCATTTGTT TTTAGGGGAA GATGCCTATA ATATGGCAAA CCAAAAAATA GCAAGTGTAA AAAGCGAATT GGAAGCATGG AAAGAGGTTT CTGTTTCTAC TGGTTTTTAA
|
Protein sequence | MDNNKVWFIT GASKGLGLEL AKKLLAEGFK VAATSRSEEA LVKVLGNSSE KFLPLEMDLV DEKSVKSAID KTINHFKTID VLVNNAGYGL LGALEELTDA ESRKNYEVNV FGLLNVIRNT MPILRANKSG HIFNISSVGG YYGEFPGWGI YCSTKFAVAG LTESLAAEVK SFGVHATIVY PGYFRTDFLK DSSLLLPQNP IADYKEVRQS ESAHKEDINQ NQPGDPVKLA EALIKASEDQ NPPLHLFLGE DAYNMANQKI ASVKSELEAW KEVSVSTGF
|
| |