Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1732 |
Symbol | |
ID | 5093074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2005556 |
End bp | 2006416 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644741143 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001194083 |
Protein GI | 146299492 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGAT ATCCCATTTA TAGTGTTCAG AATTTTAGCT GTAACGATAT TCACCGCGAT TTTTACGTCA ATACTTTTAA AGAGCATTTA AAAAGTCACA GTTTTGTCGA AGAACCACAT CGTCATGACT CGTATTTAAT GGTATTTTTT ACGAAAGGTT CAGGATTGCA TGAAGTCGAT TTTGATCAGT TCGAAATCAA AAGAGGAAGT CTTTTTGTAC TGCAGCCGGG ACAAATGCAC CATTGGAGTT TATCCGAAGA CATTGAAGGT TTTGTAATTA TCTTTTCTCA GGAATTGTAC AATTTGTATT TCGGGCAAAA AAAGATCAAC GATTATAATT TTTATCATTC TATTCAAAAC CGGCCAGAAA TGGTTTTTGA AGAAAAAGAA ATCCCAAAAA TCCAGCCTTA TTTCGATTTA CTGATTCAGG AAAATAGCCA AGACAATAAA TACCAATTAG ACAAATTATT GAATTTGTTG GATTGTATTC ATATTGAAGT AGCCAGAAAA TATGGCGAAA CCTATTCGCA TCAAACCCAT TCATACAATA TCAAAATCAA CAAGTTTGAA TTACTTTTGG AAGAATATTT CAGAACCGAG AAATTGCCTT CGTTTTATGC AGAAAAACTA AATATTACGC TGAAACATTT AAACAGAATC TGCAACGAAA TTCTCCAAAA AACAGCAACT GAAGTTATCA CAGATCGTGT AATTCTGGAA ATAAAAAGAA TGCTGATCGA TAAGCAATTA GCTGTAAACG AAGTCGCATT CAAAGTCGGT TACGAAGATT ACTCGTATTT CTCCCGTTTC TTCAAAAAAC AAACTGGAAT GTCGCCGACT GAATTTAGAA ATATAAAATA A
|
Protein sequence | MKRYPIYSVQ NFSCNDIHRD FYVNTFKEHL KSHSFVEEPH RHDSYLMVFF TKGSGLHEVD FDQFEIKRGS LFVLQPGQMH HWSLSEDIEG FVIIFSQELY NLYFGQKKIN DYNFYHSIQN RPEMVFEEKE IPKIQPYFDL LIQENSQDNK YQLDKLLNLL DCIHIEVARK YGETYSHQTH SYNIKINKFE LLLEEYFRTE KLPSFYAEKL NITLKHLNRI CNEILQKTAT EVITDRVILE IKRMLIDKQL AVNEVAFKVG YEDYSYFSRF FKKQTGMSPT EFRNIK
|
| |