Gene Fjoh_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1729 
Symbol 
ID5093071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2003024 
End bp2003929 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content33% 
IMG OID644741140 
Producthypothetical protein 
Protein accessionYP_001194080 
Protein GI146299489 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.520137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA GCTTAGATTA TAAATTAATA TTTGCCTTAG CGGCTGTTGG AATTATTTGG 
GGAACTACCT TTTTGGGGAT TAGAGTTGCG GTTGAAACTA TTCCGCCTTG GTTTGTAACT
TCAATTCGTC AGGGATTGGC AGGAATAATC ATGATGATTA TTTTATTGTT CAAAAAAGAA
TTGAAATGGA TTGGGTGGGA GAATTTAAAA CACCAGCTCG TTCCTTCTAT TTTGATGATT
GTAATTGCAA ATGGTTTTAC AACCGTTGCT GAGCAGACTG TGCCAAGCGG ACTTGCTTCG
GTAATTAGTG CTATGGCTCC TATACTTATT TTTCTGGGCA GTATTTTATT TAAATTACAA
AAACCAAGTT TAAGAGGATT TATTGGAGTC ATAATAGGAT TTTCGGGAGT GGTTTTTATA
TTTAAAGACG GACTAGGATC TTTTTTAGAT GCCGATTATA GAATTGGAAT GATGTTTATG
GGATTTGCAA TTACTGCTTG GGCGGCCGGA ACAATTTATA CCAAACTTCA TGGGAATAAA
TCTAAAAATA TAGTTCTTAA TTTATTTTAC CAGTTTACAA TGGCTTCGTG CATTCAGATT
GTTTTGGCAT TTATTTTTTC GCCCACTATT GATGTGAATT TATGGAGTAC TAAAAGTATT
TTTGCGGCAT TATATTTGTC AATTTTCGGA TCTGTAATTG CTTTTTTCAG CTATAATTAT
GCTCTGAAAC ACGTTACTCC GGTTCAGGTT TCTATTTTAG CCTATATCAA TACTATAATT
GCGGTATTTT TTGGCTGGCT GATTTTGGAT GAAAAAATTA CAATTGATTT TATAATTGCA
ACTATTCTAA TCATTTTGGG AGTTTTTATT ATTAATTACA AAAAGAAGGA AAAGAAAACT
TTATAA
 
Protein sequence
MKQSLDYKLI FALAAVGIIW GTTFLGIRVA VETIPPWFVT SIRQGLAGII MMIILLFKKE 
LKWIGWENLK HQLVPSILMI VIANGFTTVA EQTVPSGLAS VISAMAPILI FLGSILFKLQ
KPSLRGFIGV IIGFSGVVFI FKDGLGSFLD ADYRIGMMFM GFAITAWAAG TIYTKLHGNK
SKNIVLNLFY QFTMASCIQI VLAFIFSPTI DVNLWSTKSI FAALYLSIFG SVIAFFSYNY
ALKHVTPVQV SILAYINTII AVFFGWLILD EKITIDFIIA TILIILGVFI INYKKKEKKT
L